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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:32:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Scyliorhinus canicula genome assembly, chromosome: 7.
LR744036.1:58290855-58290874
AACAGCAGGATATCGGATGAATGCCTATTA58290855ATGCAATTCGGCAACAAAATGATTTGAAGATCGTATTTTGTTTGCCTGCC
Trifolium pratense DNA, clone:RCG02818.
DE214359.1:2-21
G2ATGCAATTCGGCAACAAAATGCGGATGCTTTGAAGAATCATAAGGATATA
Gossypium rotundifolium isolate GPK201 chromosome 8.
CP106729.1:185867334-185867353
GAGCAGAGGAAGCTACGTGGGAGCCCGAGG185867334ATGCAATTCGGCAACAAAATCCTCACATCTTTTAATCAGGTAAAATTTCG
Triticum aestivum genome assembly, chromosome: 4A.
LR862538.1:275763445-275763464
TGTGCCATACTCTTTAGGGAGTTCGGCCTA275763445ATGCAATTCGGCAACAAAATCGGTCAGTACTTGGGATTTGATAGCCCGAT
Triticum aestivum genome assembly, chromosome: 4A.
LR862559.1:275799184-275799203
TGTGCCATACTCTTTAGGGAGTTCGGCCTA275799184ATGCAATTCGGCAACAAAATCGGTCAGTACTTGGGATTTGATAGCCCGAT
Triticum aestivum genome assembly, chromosome: 4A.
LR865467.1:274603560-274603579
TGTGCCATACTCTTTAGGGAGTTCGGCCTA274603560ATGCAATTCGGCAACAAAATCGGTCAGTACTTGGGATTTGATAGCCCGAT
Triticum aestivum genome assembly, chromosome: 7D.
LR865478.1:626065827-626065846
AACAGCGTAAGAGGCAGACTCCAAGATATC626065827ATGCAATTCGGCAACAAAATCCACCTTGAATTCAGGATAAGCTGAGCCAT
Triticum aestivum genome assembly, chromosome: 4A.
LR865509.1:277183846-277183865
TGTGCCATACTCTTTAGGGAGTTCGGCCTA277183846ATGCAATTCGGCAACAAAATCGGTCAGTACTTGGGATTTGATAGCCCGAT
Triticum aestivum genome assembly, chromosome: 4A.
LR865748.1:278123776-278123795
TGTGCCATACTCTTTAGGGAGTTCGGCCTA278123776ATGCAATTCGGCAACAAAATCGGTCAGTACTTGGGATTTGATAGCCCGAT
Triticum aestivum genome assembly, chromosome: 4A.
LR865769.1:274697931-274697950
TGTGCCATACTCTTTAGGGAGTTCGGCCTA274697931ATGCAATTCGGCAACAAAATCGGTCAGTACTTGGGATTTGATAGCCCGAT
Triticum aestivum genome assembly, chromosome: 4A.
LR877318.1:279345165-279345184
TGTGCCATACTCTTTAGGGAGTTCGGCCTA279345165ATGCAATTCGGCAACAAAATCGGTCAGTACTTGGGATTTGATAGCCCGAT
Triticum aestivum genome assembly, chromosome: 4A.
LS992089.1:301925138-301925157
TGTGCCATACTCTTTAGGGAGTTCGGCCTA301925138ATGCAATTCGGCAACAAAATCGGTCAGTACTTGGGATTTGATAGCCCGAT
Triticum aestivum genome assembly, chromosome: 4A.
OU015730.1:275249639-275249658
TGTGCCATACTCTTTAGGGAGTTCGGCCTA275249639ATGCAATTCGGCAACAAAATCGGTCAGTACTTGGGATTTGATAGCCCGAT
Triticum aestivum genome assembly, chromosome: 4A.
OU343172.1:276304740-276304759
TGTGCCATACTCTTTAGGGAGTTCGGCCTA276304740ATGCAATTCGGCAACAAAATCGGTCAGTACTTGGGATTTGATAGCCCGAT
Triticum aestivum genome assembly, chromosome: 4A.
OU963881.1:276918458-276918477
TGTGCCATACTCTTTAGGGAGTTCGGCCTA276918458ATGCAATTCGGCAACAAAATCGGTCAGTACTTGGGATTTGATAGCCCGAT
Triticum aestivum genome assembly, chromosome: 4A.
OV100746.1:279106163-279106182
TGTGCCATACTCTTTAGGGAGTTCGGCCTA279106163ATGCAATTCGGCAACAAAATCGGTCAGTACTTGGGATTTGATAGCCCGAT
Triticum aestivum genome assembly, chromosome: 4A.
OW530319.1:279106163-279106182
TGTGCCATACTCTTTAGGGAGTTCGGCCTA279106163ATGCAATTCGGCAACAAAATCGGTCAGTACTTGGGATTTGATAGCCCGAT
Agriopis marginaria genome assembly, chromosome: 1.
OW029914.1:1959650-1959669
CTGAAAACTTTAATCGAAATTTGGATTTTG1959650ATGCAATTCGGCAACAAAATATATGATAAAATACATCGAGGAAAATCTTA
Stomorhina lunata genome assembly, chromosome: 4.
OW121743.1:123983426-123983445
AAAACTGTTGATTTTCTTGAACTAAGTAGA123983426ATGCAATTCGGCAACAAAATTATGTTTCAGAAACACGAATATTTTTTTTA
Trifolium pratense DNA, clone:RCG01519.
DE213322.1:233-252
TATATCCTTATGATTCTTCAAAGCATCCGC233ATTTTGTTGCCGAATTGCATC
Trifolium pratense DNA, clone:RCG03428.
DE214857.1:233-252
TATATCCTTATGATTCTTCAAAGCATCCGC233ATTTTGTTGCCGAATTGCATC
Trifolium pratense DNA, clone:RCG04359.
DE215630.1:233-252
TATATCCTTATGATTCTTCAAAGCATCCGC233ATTTTGTTGCCGAATTGCATC
Trifolium pratense DNA, clone:RCG04363.
DE215634.1:233-252
TATATCCTTATGATTCTTCAAAGCATCCGC233ATTTTGTTGCCGAATTGCATC
Trifolium pratense DNA, clone:RCG01153.
DE246778.1:233-252
TATATCCTTATGATTCTTCAAAGCATCCGC233ATTTTGTTGCCGAATTGCATC
Triticum aestivum genome assembly, chromosome: 7D.
LR862528.1:634173872-634173891
ATGGCTCAGCTTATCCTGAATTCAAGGTGG634173872ATTTTGTTGCCGAATTGCATGATATCTTGGAGTCTGCCTCTTACGCTGTT
Triticum aestivum genome assembly, chromosome: 7D.
LR862549.1:627466268-627466287
ATGGCTCAGCTTATCCTGAATTCAAGGTGG627466268ATTTTGTTGCCGAATTGCATGATATCTTGGAGTCTGCCTCTTACGCTGTT
Triticum aestivum genome assembly, chromosome: 7D.
LR862570.1:632761555-632761574
ATGGCTCAGCTTATCCTGAATTCAAGGTGG632761555ATTTTGTTGCCGAATTGCATGATATCTTGGAGTCTGCCTCTTACGCTGTT
Triticum aestivum genome assembly, chromosome: 7D.
LR865499.1:629964793-629964812
ATGGCTCAGCTTATCCTGAATTCAAGGTGG629964793ATTTTGTTGCCGAATTGCATGATATCTTGGAGTCTGCCTCTTACGCTGTT
Triticum aestivum genome assembly, chromosome: 7D.
LR865520.1:633380180-633380199
ATGGCTCAGCTTATCCTGAATTCAAGGTGG633380180ATTTTGTTGCCGAATTGCATGATATCTTGGAGTCTGCCTCTTACGCTGTT
Triticum aestivum genome assembly, chromosome: 7D.
LR865759.1:634265056-634265075
ATGGCTCAGCTTATCCTGAATTCAAGGTGG634265056ATTTTGTTGCCGAATTGCATGATATCTTGGAGTCTGCCTCTTACGCTGTT
Triticum aestivum genome assembly, chromosome: 7D.
LR865780.1:624919774-624919793
ATGGCTCAGCTTATCCTGAATTCAAGGTGG624919774ATTTTGTTGCCGAATTGCATGATATCTTGGAGTCTGCCTCTTACGCTGTT
Triticum aestivum genome assembly, chromosome: 7D.
LR877329.1:634211727-634211746
ATGGCTCAGCTTATCCTGAATTCAAGGTGG634211727ATTTTGTTGCCGAATTGCATGATATCTTGGAGTCTGCCTCTTACGCTGTT
Triticum aestivum genome assembly, chromosome: 7D.
LR878455.1:624819075-624819094
ATGGCTCAGCTTATCCTGAATTCAAGGTGG624819075ATTTTGTTGCCGAATTGCATGATATCTTGGAGTCTGCCTCTTACGCTGTT
Triticum aestivum genome assembly, chromosome: 7D.
LS992100.1:629407983-629408002
ATGGCTCAGCTTATCCTGAATTCAAGGTGG629407983ATTTTGTTGCCGAATTGCATGATATCTTGGAGTCTGCCTCTTACGCTGTT
Triticum turgidum subsp. durum genome assembly, chromosome: 4A.
LT934117.1:277296140-277296159
ATCGGGCTATCAAATCCCAAGTACTGACCG277296140ATTTTGTTGCCGAATTGCATTAGGCCGAACTCCCTAAAGAGTATGGCACA
Triticum aestivum genome assembly, chromosome: 7D.
OU015741.1:642731662-642731681
ATGGCTCAGCTTATCCTGAATTCAAGGTGG642731662ATTTTGTTGCCGAATTGCATGATATCTTGGAGTCTGCCTCTTACGCTGTT
Triticum aestivum genome assembly, chromosome: 7D.
OU343189.1:649123692-649123711
ATGGCTCAGCTTATCCTGAATTCAAGGTGG649123692ATTTTGTTGCCGAATTGCATGATATCTTGGAGTCTGCCTCTTACGCTGTT
Triticum aestivum genome assembly, chromosome: 7D.
OU963892.1:634076662-634076681
ATGGCTCAGCTTATCCTGAATTCAAGGTGG634076662ATTTTGTTGCCGAATTGCATGATATCTTGGAGTCTGCCTCTTACGCTGTT
Triticum aestivum genome assembly, chromosome: 7D.
OV100757.1:646324719-646324738
ATGGCTCAGCTTATCCTGAATTCAAGGTGG646324719ATTTTGTTGCCGAATTGCATGATATCTTGGAGTCTGCCTCTTACGCTGTT
Triticum aestivum genome assembly, chromosome: 7D.
OW530330.1:646324719-646324738
ATGGCTCAGCTTATCCTGAATTCAAGGTGG646324719ATTTTGTTGCCGAATTGCATGATATCTTGGAGTCTGCCTCTTACGCTGTT
Triticum aestivum genome assembly, chromosome: 7D.
OX637245.1:477224545-477224564
ATGGCTCAGCTTATCCTGAATTCAAGGTGG477224545ATTTTGTTGCCGAATTGCATGATATCTTGGAGTCTGCCTCTTACGCTGTT
Hymenolepis microstoma genome assembly, chromosome: 4.
LR215995.1:9249902-9249921
CGTTTGCAAGAGATGTCCAATGCTCGACTT9249902ATTTTGTTGCCGAATTGCATATTTTTTTCAATCAATGGTTGTCATTTTAG
Patella vulgata genome assembly, chromosome: 3.
OW026350.2:70725421-70725440
CTCATACCACTGCATATCAATACATGTTTG70725421ATTTTGTTGCCGAATTGCATAGTGCTAGATATTTGATTGGTGGCCGTAAG
Chrysolina americana genome assembly, chromosome: 7.
OY293416.1:444930-444949
ACCTTAGAGTTGCTATTGTTACTGTCTATG444930ATTTTGTTGCCGAATTGCATAAGTTAAAATAAATAAATTTTATTTTGGGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGCAATTCGGCAACAAAAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGCAATTCGGCAACAAAAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.304 | 0.296 | search_plus_done; http://172.18.8.135:50400/match?q=ATGCAATTCGGCAACAAAAT&k=0&no_gap=0&offset=0&limit=50
0.504 | 0.200 | search_minus_done; http://172.18.8.135:50400/match?q=ATTTTGTTGCCGAATTGCAT&k=0&no_gap=0&offset=0&limit=31
0.521 | 0.017 | cgi_end;

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