GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 13:21:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Cucumis melo clone BAC 34-18-1 genomic sequence, complete sequence, sequence.
KY643743.1:35305-35324
TTTAATAAGACTAGTTAAAGGGGATGTGGA35305ATGCACCTACTTGTTGTTGTTGTTGTTTGGTTTTTTTTTTTTTTTTAAAG
Cucumis melo clone BAC 90D15 genomic sequence, complete sequence, sequence.
KY643744.1:53134-53153
TTTAATAAGACTAGTTAAAGGGGATGTGGA53134ATGCACCTACTTGTTGTTGTTGTTGTTTGTTTTTTTTTTTTTTTTTTAAA
Lucinisca nassula genome assembly, chromosome: 3.
OY757012.1:12146824-12146843
TGTGGTTTGAAAATATGAAATTTTTATCAT12146824ATGCACCTACTTGTTGTTGTTGTTGTTGTTTTCCAGTTTCCCCGTGTCGC
Cucumis melo isolate PI 511890 chromosome 2.
CP136103.1:1005406-1005425
AAAAAAAAAAAAAAAAAAAAAACAACAACA1005406ACAACAACAAGTAGGTGCATTCCACATCCCCTTTAACTAGTCTTATTAAA
Cucumis melo genomic scaffold, anchoredscaffold00025.
LN681806.1:1004739-1004758
CTTTAAAAAAAACAAACAACAACAACAACA1004739ACAACAACAAGTAGGTGCATTCCACATCCCCTTTAACTAGTCTTATTAAA
Cucumis melo genomic chromosome, chr_2.
LN713256.1:1004739-1004758
CTTTAAAAAAAACAAACAACAACAACAACA1004739ACAACAACAAGTAGGTGCATTCCACATCCCCTTTAACTAGTCTTATTAAA
Harmothoe impar genome assembly, chromosome: 9.
OX381712.1:22985265-22985284
GCTATTTCTTTATTCAGGCAAAGGATTACA22985265ACAACAACAAGTAGGTGCATTAAATCATGAATAGGGCCTAAATCTAGGTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATGCACCTACTTGTTGTTGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGCACCTACTTGTTGTTGT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.102 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=ATGCACCTACTTGTTGTTGT&k=0&no_gap=0&offset=0&limit=50
0.131 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=ACAACAACAAGTAGGTGCAT&k=0&no_gap=0&offset=0&limit=47
0.134 | 0.003 | cgi_end;

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