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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-06 09:35:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:52378584-52378603
GAAAAAACTCAAAAAAGAGATGTGCATGAC52378584ATGCATTGCTGGTTCTAAGGAACTACAAACTTATATAAAAGAGCAAATAT
Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:52554997-52555016
AAAACGAAAGAAAAAAGAGATGTGCATGAC52554997ATGCATTGCTGGTTCTAAGGAATTACAAATTTGTACAAATCCTTGTTTAC
Cryptosula pallasiana genome assembly, chromosome: 9.
OX183138.1:6861985-6862004
TAAGCTTAGTATGCATTGTGAGGTTTATGT6861985ATGCATTGCTGGTTCTAAGGCTAACCTGATCTCTCAACCTGAATACTACA
Trifolium fragiferum genome assembly, chromosome: 2.
OX940790.1:7553682-7553701
ACCCTTGTTTTTTTATACAAATTTGTAATT7553682CCTTAGAACCAGCAATGCATGTCATGCACATCTTTTTTTCTTTCGTTTTT
Trifolium fragiferum genome assembly, chromosome: 2.
OX940790.1:7590797-7590816
TATTTGCTCTTTTTATACACATTTGTAATT7590797CCTTAGAACCAGCAATGCATGTCATGCAGATCTCCATTTTTTTTAATATA
Trifolium fragiferum genome assembly, chromosome: 2.
OX940790.1:7597673-7597692
ACCCTTGTTTTTTTATACAAATTTGTAATT7597673CCTTAGAACCAGCAATGCATGTCATGCACATCTTTTTTTCTTTCGTTTTT
Trifolium fragiferum genome assembly, chromosome: 2.
OX940790.1:7657261-7657280
ATATTTGCTCTTTTATACAAATTTGTAATT7657261CCTTAGAACCAGCAATGCATGTCATGCACATCTCCATTTTTTTTAATATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGCATTGCTGGTTCTAAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGCATTGCTGGTTCTAAGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.375 | 0.367 | search_plus_done; http://172.18.8.135:50400/match?q=ATGCATTGCTGGTTCTAAGG&k=0&no_gap=0&offset=0&limit=50
0.495 | 0.120 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTAGAACCAGCAATGCAT&k=0&no_gap=0&offset=0&limit=47
0.498 | 0.003 | cgi_end;

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