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2025-04-03 11:24:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

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UCRPT01_0014L11_f Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0014L11, mRNA sequence.
CV710655.1:312-331
GACACCATAATGTCATCAATTCCCTTCTCC312ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
UCRCS04_2_023F09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_023_T3_F09, mRNA sequence.
CV886522.1:328-347
GACACCATAATGTCATCGATTCCCTTCTCC328ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
UCRCS08_24B05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-24B05-D10-1-5.b, mRNA sequence.
CX071810.1:359-378
GACACCATAATGTCATCGATTCCCTTCTCC359ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
UCRCS08_3A03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-3A03-B5-1-4.b, mRNA sequence.
CX074542.1:356-375
GACACCATAATGTCATCGATTCCCTTCTCC356ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
UCRPT01_5_005_E10_T3 Poncirus trifoliata CTV-challenged cDNA library - UCRPT01-UCR2 Citrus trifoliata cDNA clone UCRPT01_005_T3_E10, mRNA sequence.
CX543231.1:360-379
GACACCATAATGTCATCAATTCCCTTCTCC360ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
UCRPT02_61C03_b Poncirus trifoliata Roots with Iron Deficiency - UCRPT02-UCR1 Citrus trifoliata cDNA clone UCRPT02-61C03-F6-1-6.b, mRNA sequence.
CX642721.1:347-366
GACACCATAATGTCATCAATTCCCTTCTCC347ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
UCRCP01_013_B05_T7 Swingle citrumelo nematode-challenged root cDNA library - UCRCP01 Citrus x paradisi x Citrus trifoliata cDNA clone UCRCP01_013_T7_B05, mRNA sequence.
CX664896.1:364-383
GACACCATAATGTCATCGATTCCCTTCTCC364ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
UCRCP01_037_A12_T7 Swingle citrumelo nematode-challenged root cDNA library - UCRCP01 Citrus x paradisi x Citrus trifoliata cDNA clone UCRCP01_037_T7_A12, mRNA sequence.
CX668343.1:361-380
GACACCATAATGTCATCGATTCCCTTCTCC361ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
UCRCS10_11C08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11C08-F15-6.b, mRNA sequence.
CX671472.1:375-394
GACACCATAATGTCATCGATTCCCTTCTCC375ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
UCRCS10_12F11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12F11-L22-6.b, mRNA sequence.
CX671709.1:237-256
GACACCATAATGTCATCGATTCCCTTCTCC237ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
UCRCS10_17C03_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17C03-E5-6.g, mRNA sequence.
CX672482.1:281-300
GACACCATAATGTCATCGATTCCCTTCTCC281ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
UCRCS10_18E05_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-18E05-I10-5.b, mRNA sequence.
CX672673.1:366-385
GACACCATAATGTCATCGATTCCCTTCTCC366ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
UCRCS10_22A03_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-22A03-A6-5.b, mRNA sequence.
CX673329.1:261-280
GACACCATAATGTCATCGATTCCCTTCTCC261ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
UCRCS10_22F08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-22F08-K16-5.b, mRNA sequence.
CX673439.1:375-394
GACACCATAATGTCATCGATTCCCTTCTCC375ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
UCRCS10_2C07_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-2C07-E14-5.b, mRNA sequence.
CX673845.1:280-299
GACACCATAATGTCATCGATTCCCTTCTCC280ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
Citrus unshiu mRNA, clone: SLG0957, 5'-end sequence, expressed in hypocotyl.
DC897540.1:329-348
GACACCATAATGTCATCGATTCCCTTCTCC329ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
UCRCS11_04P20_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0004P20, mRNA sequence.
DN620203.1:375-394
GACACCATAATGTCATCGATTCCCTTCTCC375ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
UCRCA01_06J09_r Bark of Madame Vinous Sweet Orange Scion on Standard Sour Orange Rootstock, Citrus Tristeza Virus Challenged - UCRCA01 Citrus aurantium cDNA clone CA_SEa0006J09, mRNA sequence.
DN625537.1:357-376
GACACCATAATGTCATCGATTCCCTTCTCC357ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
CP-1_F02_015.f1 Citrus paradisi young grapefruit leaf cDNA library Citrus x paradisi cDNA clone CP-1_F02_015 3', mRNA sequence.
EB684960.1:409-428
GACACCATAATGTCATCGATTCCCTTCTCC409ATGCCTCTCAACCCACACATGTACACATAAGTGTTGTCTTTCTTGAGTAA
CP-22_B01_009.f1 Citrus paradisi young grapefruit leaf cDNA library Citrus x paradisi cDNA clone CP-22_B01_009 3', mRNA sequence.
EB685120.1:363-382
GACACCATAATGTCATCGATTCCCTTCTCC363ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
CP-8_D12_094.f1 Citrus paradisi young grapefruit leaf cDNA library Citrus x paradisi cDNA clone CP-8_D12_094 3', mRNA sequence.
EB685971.1:344-363
GACACCATAATGTCATCGATTCCCTTCTCC344ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
CP38_D04_030.f1 Citrus paradisi young grapefruit leaf cDNA library Citrus x paradisi cDNA clone CP38_D04_030 3', mRNA sequence.
EB686746.1:342-361
GACACCATAATGTCATCGATTCCCTTCTCC342ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
CP43_F03_028.f1 Citrus paradisi young grapefruit leaf cDNA library Citrus x paradisi cDNA clone CP43_F03_028 3', mRNA sequence.
EB687036.1:396-415
GACACCATAATGTCATCGATTCCCTTCTCC396ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
CP45_D05_043.f1 Citrus paradisi young grapefruit leaf cDNA library Citrus x paradisi cDNA clone CP45_D05_043 3', mRNA sequence.
EB687169.1:343-362
GACACCATAATGTCATCGATTCCCTTCTCC343ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
QM0AAA4AD01RM1 CCL1 Citrus clementina genomic clone CCL021G01, genomic survey sequence.
ET070409.1:398-417
GACACCATAATGTCATCGATTCCCTTCTCC398ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
Citrus sinensis genome assembly, chromosome: 4.
OY754321.1:29661699-29661718
GACACCATAATGTCATCGATTCCCTTCTCC29661699ATGCCTCTCAACCCACACATGTACACATAAGTGTTATCTTTCTTGAGTAA
Sequence 1540 from patent US 10006042.
MI846267.1:1195-1214
TTACTCAAGAAAGATAACACTTATGTGTAC1195ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
Sequence 1540 from patent US 10337023.
MO169434.1:1195-1214
TTACTCAAGAAAGATAACACTTATGTGTAC1195ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
Sequence 1540 from patent US 10774340.
MV703181.1:1195-1214
TTACTCAAGAAAGATAACACTTATGTGTAC1195ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
Sequence 1037 from patent US 10858403.
MX112507.1:1195-1214
TTACTCAAGAAAGATAACACTTATGTGTAC1195ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
Sequence 1037 from patent US 11421004.
OO461870.1:1195-1214
TTACTCAAGAAAGATAACACTTATGTGTAC1195ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
Sequence 1037 from patent US 11472853.
OO763990.1:1195-1214
TTACTCAAGAAAGATAACACTTATGTGTAC1195ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
Sequence 1037 from patent US 11485761.
OO823148.1:1195-1214
TTACTCAAGAAAGATAACACTTATGTGTAC1195ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
Sequence 1540 from patent US 11499161.
OO870962.1:1195-1214
TTACTCAAGAAAGATAACACTTATGTGTAC1195ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
USDA-FP_117000-327 Immature Ovaries from field collected Flying Dragon Trifoliate Orange Citrus trifoliata cDNA clone TFF-26_A08 5', mRNA sequence.
CF419386.1:241-260
TTACTCAAGAAAGATAACACTTATGTGTAC241ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATTGATGACATTATGGTGTC
USDA-FP_118000-520 Immature Ovaries from field collected Flying Dragon Trifoliate Orange Citrus trifoliata cDNA clone TFF-6T3_C11 5', mRNA sequence.
CF420518.1:241-260
TTACTCAAGAAAGATAACACTTATGTGTAC241ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATTGATGACATTATGGTGTC
USDA-FP_118000-870 Immature Ovaries from field collected Flying Dragon Trifoliate Orange Citrus trifoliata cDNA clone TFF-27_A03 5', mRNA sequence.
CF420867.1:241-260
TTACTCAAGAAAGATAACACTTATGTGTAC241ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATTGATGACATTATGGTGTC
UCRCS05_0003H13_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003H13, mRNA sequence.
CN186805.1:280-299
CACACTGGGAAAGATAACACTTATGTGTAC280ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
UCRCS04_2_023F09_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_023_T7_F09, mRNA sequence.
CV886523.1:777-796
TTACTCAAGAAAGATAACACTTATGTGTAC777ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
UCRCS08_3A03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-3A03-B5-1-5.g, mRNA sequence.
CX074543.1:689-708
TTACTCAAGAAAGATAACACTTATGTGTAC689ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
C16001D05SK CTVLeafMc1 Citrus macrophylla cDNA clone C16001D05, mRNA sequence.
CX303698.1:235-254
TTACTCAAGAAAGATAACACTTATGTGTAC235ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATCATGGTGTC
C16018F07SK ExocortL1 Citrus medica cDNA clone C16018F07, mRNA sequence.
CX305062.1:296-315
TTACTCAAGAAAGATAACACTTTTGTGTAC296ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
Citrus unshiu mRNA, clone: BFC2A36, 5'-end sequence, expressed in flavedo.
DC885147.1:25-44
GAGAAAGATAACACTTATGTGTAC25ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
Volcani_7_22_B11 Volcani07 Citrus reticulata x Citrus temple cDNA, mRNA sequence.
EX446776.1:623-642
TTACTCAAGAAAGATAACACTTATGTGTAC623ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
CS00-C1-100-032-D11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY652363.1:761-780
TTACTNCAGAAAGATAACACTTATGTGTAC761ATGTGTGGGTTGAGAGGCATGGAGAAGGCATCGATGACATTATGGTGTCA
CS00-C1-101-024-G12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
EY660682.1:183-202
TTACTCAAGAAAGATAACACTTATGTGTAC183ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
CS00-C1-102-095-C04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
EY665758.1:185-204
TTACTCAAGAAAGATAACACTTATGTGTAC185ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
CS00-C1-102-015-B08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
EY666198.1:573-592
TTACTCAAGAAAGATAACACTTATGTGTAC573ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
CS00-C1-401-009-D07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
EY675349.1:401-420
TTACTCAAGAAAGATAACACTTATGTGTAC401ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
CS00-C1-401-011-E10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
EY675513.1:398-417
TACTCAAGAAAGATAACACNTTATGTGTAC398ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
CS00-C1-401-017-G11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
EY676025.1:61-80
TTACTCAAGAAAGATAACACTTATGTGTAC61ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
CS00-C1-401-018-F01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
EY676091.1:75-94
TTACTCAAGAAAGATAACACTTATGTGTAC75ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
CS00-C1-401-021-B07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
EY676301.1:74-93
TTACTCAAGAAAGATAACACTTATGTGTAC74ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
CS00-C1-650-005-B04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY679888.1:448-467
TTACTCAAGAAAGATAACACTTATGTGTAC448ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
CS00-C1-650-019-G06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY681236.1:301-320
TTACTCAAGAAAGATAACACTTATGTGTAC301ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
CS00-C3-700-067-C11-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
EY698045.1:113-132
TTACTCAAGAAAGATAACACTTATGTGTAC113ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
CS00-C3-701-076-E10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
EY708145.1:25-44
CCACGCGTCCGCACTTATGTGTAC25ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
CS00-C3-702-008-B09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
EY711476.1:538-557
TTACTCAAGAAAGATAACACTTATGTGTAC538ATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTC
Harmothoe impar genome assembly, chromosome: 3.
OX381706.1:18793289-18793308
CATGGACCTGAAAATGTTATTAGGATGAGA18793289ATGTGTGGGTTGAGAGGCATGCAGATCTATGCCCTTATATGCCATCCCCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGCCTCTCAACCCACACAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGCCTCTCAACCCACACAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.465 | 1.456 | search_plus_done; http://172.18.8.135:50400/match?q=ATGCCTCTCAACCCACACAT&k=0&no_gap=0&offset=0&limit=50
3.676 | 2.211 | search_minus_done; http://172.18.8.135:50400/match?q=ATGTGTGGGTTGAGAGGCAT&k=0&no_gap=0&offset=0&limit=24
3.697 | 0.021 | cgi_end;

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