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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:45:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

GA__Eb0024O09f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Eb0024O09f, mRNA sequence.
BF275757.1:732-751
ACGTCTTCGTCGGCTTTCATTATCTTCTTA732ATGCGAGCTAATGGGAGTTGGTGGGTCTAAAATCGTTACTTGCTCGATTC
rGB-SNP_Gh_126 rGB-SNP_Gh Gossypium herbaceum genomic, genomic survey sequence.
DX918829.1:158-177
ACGTCTTCGTCGGCTTTCATTATCTTCTTA158ATGCGAGCTAATGGGAGTTGGTGGTTCTTAAAATCGTTAACTTGCTCGAT
rGB-SNP_Ga_126 rGB-SNP_Ga Gossypium arboreum genomic, genomic survey sequence.
DX919447.1:155-174
ACGTCTTCGTCGGCTTTCATTATCTTCTTA155ATGCGAGCTAATGGGAGTTGGTGGTTCTTAAAATCGTTAACTTGCTCGAT
rGB-SNP_Gs_126 rGB-SNP_Gs Gossypium sturtianum genomic, genomic survey sequence.
DX920090.1:158-177
ACGTCTTCGTCGGCTTTCATTATCTTCTTA158ATGCGAGCTAATGGGAGTTGGTGGTTCTTAAAATCGTTAACTTGCTCGAT
rGB-SNP_Gr_126 rGB-SNP_Gr Gossypium raimondii genomic, genomic survey sequence.
DX920715.1:159-178
ACGTCTTCGTCGGCTTTCATTATCTTCTTA159ATGCGAGCTAATGGGAGTTGGTGGTTCTTAAAATCGTTAACTTGCTCGAT
rGB-SNP_Gt_126 rGB-SNP_Gt Gossypium trilobum genomic, genomic survey sequence.
DX921343.1:156-175
ACGTCTTCGTCGGCTTTCATTATCTTCTTA156ATGCGAGCTAATGGGAGTTGGTGGTTCTTAAAATCGTTAACTTGCTCGAT
rGB-SNP_Ki_126 rGB-SNP_Ki Gossypioides kirkii genomic, genomic survey sequence.
DX921970.1:159-178
ACGTCTTCATCGGCTTTCATTATCTTCTTA159ATGCGAGCTAATGGGAGTTGGTGGTTCTTAAAATCGTTGACTTGCTCGAT
Gossypioides kirkii chromosome KI_07.
CP032249.1:32926449-32926468
ACGTCTTCATCGGCTTTCATTATCTTCTTA32926449ATGCGAGCTAATGGGAGTTGGTGGTTCTTAAAATCGTTGACTTGCTCGAT
Gossypium turneri isolate D10-2 chromosome D10_07.
CP032577.1:47967191-47967210
ACGTCTTCGTCGGCTTTCATTATCTTCTTA47967191ATGCGAGCTAATGGGAGTTGGTGGTTCTTAAAATCGTTAACTTGCTCGAT
Gossypium herbaceum isolate GPA1alz chromosome 7.
CP106706.1:95282095-95282114
ACGTCTTCGTCGGCTTTCATTATCTTCTTA95282095ATGCGAGCTAATGGGAGTTGGTGGTTCTTAAAATCGTTAACTTGCTCGAT
Sequence 2215 from patent US 7960612.
GY262013.1:208-227
ATCGAGCAAGTTAACGATTTTAAGAACCAC208CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Sequence 9640 from patent US 7960612.
GY267687.1:293-312
ATCGAGCAAGTTAACGATTTTAAGAACCAC293CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Sequence 9842 from patent US 7960612.
GY267889.1:367-386
ATCGAGCAAGTTAACGATTTTAAGAACCAC367CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Sequence 2191 from patent US 8030546.
GY455975.1:208-227
ATCGAGCAAGTTAACGATTTTAAGAACCAC208CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Sequence 5055 from patent US 8030546.
GY457329.1:208-227
ATCGAGCAAGTTAACGATTTTAAGAACCAC208CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Sequence 15762 from patent US 8030546.
GY467987.1:293-312
ATCGAGCAAGTTAACGATTTTAAGAACCAC293CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Sequence 16109 from patent US 8030546.
GY468334.1:367-386
ATCGAGCAAGTTAACGATTTTAAGAACCAC367CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Sequence 197 from Patent EP2046111.
HI284340.1:347-366
ATCGAGCAAGTTAACGATTTTAAGAACCAC347CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Sequence 200 from Patent EP2046111.
HI284343.1:208-227
ATCGAGCAAGTTAACGATTTTAAGAACCAC208CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Sequence 197 from patent US 8927811.
HK353358.1:347-366
ATCGAGCAAGTTAACGATTTTAAGAACCAC347CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Sequence 200 from patent US 8927811.
HK353359.1:208-227
ATCGAGCAAGTTAACGATTTTAAGAACCAC208CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Sequence 197 from Patent EP2471355.
JA834321.1:347-366
ATCGAGCAAGTTAACGATTTTAAGAACCAC347CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Sequence 200 from Patent EP2471355.
JA834324.1:208-227
ATCGAGCAAGTTAACGATTTTAAGAACCAC208CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Sequence 2191 from patent US 10597667.
MO967128.1:208-227
ATCGAGCAAGTTAACGATTTTAAGAACCAC208CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Sequence 5055 from patent US 10597667.
MO968482.1:208-227
ATCGAGCAAGTTAACGATTTTAAGAACCAC208CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Sequence 15762 from patent US 10597667.
MO979140.1:293-312
ATCGAGCAAGTTAACGATTTTAAGAACCAC293CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Sequence 16109 from patent US 10597667.
MO979487.1:367-386
ATCGAGCAAGTTAACGATTTTAAGAACCAC367CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
GA__Ea0002G03f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ea0002G03f, mRNA sequence.
BE051923.2:295-314
ATCGAGCAAGTTAACGATTNTAAGAACCAC295CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
GA__Ea0004E08f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ea0004E08f, mRNA sequence.
BE053572.2:282-301
ATCGAGCAAGTTAACGATTTTAAGAACCAC282CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
GA__Ea0010D12f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ea0010D12f, mRNA sequence.
BG440805.1:295-314
ATCGAGCAAGTTAACGATTTTAAGAACCAC295CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
GA__Eb0042K16f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Eb0042K16f, mRNA sequence.
BG447405.1:321-340
ATCGAGCAAGTTAACGATTNTAAGAACCAC321CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
GA__Ed0003D02f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ed0003D02f, mRNA sequence.
BQ401417.1:321-340
ATCGAGCAAGTTAACGATTTTAAGAACCAC321CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
GA__Ed0018A03f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ed0018A03f, mRNA sequence.
BQ409246.1:230-249
AAAATCAGCAAGTAACGATTTAAGAACCAC230CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
GA__Ed0041B06f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ed0041B06f, mRNA sequence.
BQ411597.1:237-256
ATCGAGCAAGTTAACGATTTTAAGAACCAC237CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
GR__Ea45A02.r GR__Ea Gossypium raimondii cDNA clone GR__Ea45A02 3', mRNA sequence.
CO081139.1:347-366
ATCGAGCAAGTTAACGATTTTAAGAACCAC347CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
GR__Ea09E16.f GR__Ea Gossypium raimondii cDNA clone GR__Ea09E16 5', mRNA sequence.
CO089688.1:367-386
ATCGAGCAAGTTAACGATTTTAAGAACCAC367CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
EST1061269 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT550629.1:293-312
ATCGAGCAAGTTAACGATTTTAAGAACCAC293CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
EST1063190 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT552550.1:297-316
ATCGAGCAAGTTAACGATTTTAAGAACCAC297CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
EST1064095 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT553455.1:299-318
ATCGAGCAAGTTAACGATTTTAAGAACCAC299CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
UFL_579_81 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES791173.1:216-235
ATCGAGCAAGTTAACGATTTTAAGAACCAC216CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
UFL_351_92 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES820828.1:246-265
ATCGAGCAAGTTAACGATTTTAAGAACCAC246CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
UFL_109_66 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES844336.1:295-314
ATCGAGCAAGTTAACGATTTTAAGAACCAC295CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
EST002900 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 12-C22 5', mRNA sequence.
GR709700.1:276-295
ATCGAGCAAGTTAACGATTTTAAGAACCAC276CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Gossypium raimondii isolate D5-4 chromosome D5_07.
CP032559.1:5843759-5843778
TCGAGCAAGTTTAACGATTTTAAGAACCAC5843759CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Gossypium herbaceum isolate Zhongcao1 chromosome 7.
CP106693.1:6606738-6606757
ATCGAGCAAGTTAACGATTTTAAGAACCAC6606738CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Gossypium bickii isolate GPG1lz chromosome 7.
CP106719.1:7772519-7772538
ATCGAGCAAGTTAACGATTTTAAGAACCAC7772519CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Gossypium rotundifolium isolate GPK201 chromosome 7.
CP106728.1:9879850-9879869
ATCGAGCAAGTTAACGATTTTAAGAACCAC9879850CAACTCCCATTAGCTCGCATTAAGAAGATAATGAAAGCCGACGAAGACGT
Bimastos eiseni genome assembly, chromosome: 3.
OY365808.1:43272571-43272590
ATGTCCAAGCATTCCTACATGTCGACTGGA43272571CAACTCCCATTAGCTCGCATCGTTGACTCTTTAACTCATGACTTAGGCCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGCGAGCTAATGGGAGTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGCGAGCTAATGGGAGTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.414 | 0.405 | search_plus_done; http://172.18.8.135:50400/match?q=ATGCGAGCTAATGGGAGTTG&k=0&no_gap=0&offset=0&limit=50
1.742 | 1.328 | search_minus_done; http://172.18.8.135:50400/match?q=CAACTCCCATTAGCTCGCAT&k=0&no_gap=0&offset=0&limit=40
1.767 | 0.025 | cgi_end;

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