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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-08 17:22:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Bufo bufo genome assembly, chromosome: 8.
LR991674.1:20479716-20479735
CAAAGGGTGAAATCCGCACAAACAATTGAT20479716ATGCTGCGAATTTCACAATCTGCGCCGCAGCAGGTCAATGTCTACGCAGC
Lotus japonicus genomic DNA, chromosome 1, clone: LjB16L15, BM1010.
AP007739.2:89281-89300
TGATTAGATGGATAACTAGAAGAAACTATT89281GATTGTGAAATTCGCAGCATAAACATGAATCATCAGCATATGAGTGTGAC
Lotus japonicus genomic DNA, chromosome 1, clone: LjT43P05, TM0113.
AP004942.1:7376-7395
TGATTAGATGGATAACTAGAAGAAACTATT7376GATTGTGAAATTCGCAGCATAAACATGAATCATCAGCATATGAGTGTGAC
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:109783059-109783078
TGATTAGATGGATAACTAGAAGAAACTATT109783059GATTGTGAAATTCGCAGCATAAACATGAATCATCAGCATATGAGTGTGAC
Tridacna gigas genome assembly, chromosome: 9.
OX244036.2:59593106-59593125
GTTAGCGTTGTTTTGGTGAAACGTAGATTT59593106GATTGTGAAATTCGCAGCATCATGAAAATTAGTCTGGTTCTGTACCCAGA
Polietes domitor genome assembly, chromosome: 2.
OX377619.1:166533134-166533153
TAGAATATTCCTAATTCACTTGATCTATGT166533134GATTGTGAAATTCGCAGCATTTGTAGCCATCATAATTACCTTTACCAACT
Troglohyphantes excavatus genome assembly, chromosome: 7.
OZ010672.1:11893586-11893605
TTTTCTTTCTTGTAAACTATGATGTAAAAT11893586GATTGTGAAATTCGCAGCATGAAACTTCATACATATGCAAATTTTGCATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGCTGCGAATTTCACAATC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGCTGCGAATTTCACAATC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.348 | 0.339 | search_plus_done; http://172.18.8.135:50400/match?q=ATGCTGCGAATTTCACAATC&k=0&no_gap=0&offset=0&limit=50
0.439 | 0.091 | search_minus_done; http://172.18.8.135:50400/match?q=GATTGTGAAATTCGCAGCAT&k=0&no_gap=0&offset=0&limit=49
0.443 | 0.004 | cgi_end;

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