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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 14:59:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TSA: Musa acuminata AAA Group Unigene86562_B1 mRNA sequence.
JV355203.1:759-778
GGGTTAGGGTTGAAGTCGCCGGGGAGCAGG759ATGCTTCTGCTGACGAGGTTTCTTAGCAGGGATGCGAGGGT
Musa troglodytarum cultivar karat chromosome 7.
CP097509.1:27936594-27936613
GGGTTAGGGTTGAAGTCGCCGGGGAGCAGG27936594ATGCTTCTGCTGACGAGGTTTCTTAGCAGGGATTCAAGGGTTTGCTGCGG
Dorcus parallelipipedus genome assembly, chromosome: 7.
OY284482.1:19094459-19094478
GTCGGTTTTTTGCAGTGGAGTTCTTGAGCT19094459ATGCTTCTGCTGACGAGGTTCCAAATAGGCCGAAACAGCTGTACAAAGGA
TSA: Musa acuminata AAA Group Unigene11969_NK1 mRNA sequence.
JV435010.1:222-241
CCGCGGCAAACCCTCGCATCCCTGCTAAGA222AACCTCGTCAGCAGAAGCATCCTGCTCCCCGGCGACTTCAACCCTAACCC
Musa acuminata subsp. malaccensis isolate AA chromosome 7.
CP126376.1:23994573-23994592
CCGCGGCAAACCCTCGCATCCCTGCTAAGA23994573AACCTCGTCAGCAGAAGCATCCTGCTCCCCGGCGACTTCAACCCTAACCC
Musa acuminata subsp. malaccensis isolate AA chromosome 18.
CP126387.1:23595832-23595851
CCGCGGCAAACCCTCGCATCCCTGCTAAGA23595832AACCTCGTCAGCAGAAGCATCCTGCTCCCCGGCGACTTCAACCCTAACCC
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A07.
HG996473.1:24158150-24158169
CCGCGGCAAACCCTCGCATCCCTGCTAAGA24158150AACCTCGTCAGCAGAAGCATCCTGCTCCCCGGCGACTTCAACCCTAACCC
Musa schizocarpa genome assembly, chromosome: S07.
LS990920.1:27914906-27914925
CCGCGGCAAACCCTCGCATCCCTGCTAAGA27914906AACCTCGTCAGCAGAAGCATCCTGCTCCCCGGCGACTTCAACCCTAACCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGCTTCTGCTGACGAGGTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGCTTCTGCTGACGAGGTT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.179 | 0.170 | search_plus_done; http://172.18.8.135:50400/match?q=ATGCTTCTGCTGACGAGGTT&k=0&no_gap=0&offset=0&limit=50
0.286 | 0.107 | search_minus_done; http://172.18.8.135:50400/match?q=AACCTCGTCAGCAGAAGCAT&k=0&no_gap=0&offset=0&limit=47
0.289 | 0.004 | cgi_end;

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