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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:28:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Solanum melongena mRNA, clone: AE003D03, 3'end, expressed in ovary at anthesis.
FS001249.1:214-233
ATACATTTCACAATACACTTCACTTATTCT214ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: AE004D19, 3'end, expressed in ovary at anthesis.
FS001923.1:74-93
ATACATTTCACAATACACTTCACTTATTCT74ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: AE505C22, 3'end, expressed in ovary at 5d post-anthesis.
FS006412.1:184-203
ATACATTTCACAATACACTTCACTTATTCT184ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: CAL02C14, 3'end, expressed in callus at 3d after subculture.
FS008655.1:200-219
ATACATTTCACAATACACTTCACTTATTCT200ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: CAL06F06, 3'end, expressed in callus at 3d after subculture.
FS010984.1:184-203
ATACATTTCACAATACACTTCACTTATTCT184ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: LS001M12, 3'end, expressed in ovary at anthesis.
FS018200.1:214-233
ATACATTTCACAATACTCTTCACTTATTCT214ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: MLF03C11, 3'end, expressed in leaf at fully expanded leaf.
FS023990.1:209-228
ATACATTTCACAATACACTTCACTTATTCT209ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: OVS01P02, 3'end, expressed in ovary at 5d pre-anthesis.
FS030105.1:216-235
ATACATTTCACAATACACTTCACTTATTCT216ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: OVS06F16, 3'end, expressed in ovary at 5d pre-anthesis.
FS032849.1:238-257
ATACATTTCACAATACACTTCACTTATTCT238ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: PED02G18, 3'end, expressed in peduncle at anthesis.
FS034063.1:211-230
ATACATTTCACAATACACTTCACTTATTCT211ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: PED04B13, 3'end, expressed in peduncle at anthesis.
FS035159.1:238-257
ATACATTTCACAATACACTTCACTTATTCT238ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAA
Solanum melongena mRNA, clone: PED04G14, 3'end, expressed in peduncle at anthesis.
FS035366.1:70-89
ATACATTTCACAATACACTTCACTTATTCT70ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: PED05I08, 3'end, expressed in peduncle at anthesis.
FS036064.1:214-233
ATACATTTCACAATACACTTCACTTATTCT214ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: PED07H01, 3'end, expressed in peduncle at anthesis.
FS037270.1:167-186
ATACATTTCACAATACACTTCACTTATTCT167ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: PER02F01, 3'end, expressed in pericarp at 10d after anthesis.
FS038426.1:177-196
ATACATTTCACAATACACTTCACTTATTCT177ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: PER03E21, 3'end, expressed in pericarp at 10d after anthesis.
FS039015.1:240-259
ATACATTTCGCAATACACTTCACTTATTCT240ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: PER04C12, 3'end, expressed in pericarp at 10d after anthesis.
FS039560.1:184-203
ATACATTTCACAATACACTTCACTTATTCT184ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: PER05G18, 3'end, expressed in pericarp at 10d after anthesis.
FS040308.1:227-246
ATACATTTCACAATACACTTCACTTATTCT227ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: PER05M16, 3'end, expressed in pericarp at 10d after anthesis.
FS040510.1:95-114
ATACATTTCACAATACACTTCACTTATTCT95ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: PER06F07, 3'end, expressed in pericarp at 10d after anthesis.
FS040807.1:220-239
ATACATTTCACAATACACTTCACTTATTCT220ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: PER08B20, 3'end, expressed in pericarp at 10d after anthesis.
FS041956.1:184-203
ATACATTTCACAATACACTTCACTTATTCT184ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: PLA01G10, 3'end, expressed in mixture of placenta and immature seed at 10d after anthesis.
FS042785.1:234-253
ATACATTTCACAATACACTTCACTTATTCT234ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: PLA01H02, 3'end, expressed in mixture of placenta and immature seed at 10d after anthesis.
FS042814.1:236-255
ATACATTTCACAATACACTTCACTTATTCT236ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: PLA04C15, 3'end, expressed in mixture of placenta and immature seed at 10d after anthesis.
FS044619.1:178-197
ATACACTTCACGATACACTTCACTTATTCT178ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGGAG
Solanum melongena mRNA, clone: PLA05I02, 3'end, expressed in mixture of placenta and immature seed at 10d after anthesis.
FS045508.1:228-247
ATACATTTCACAATACACTTCACTTATTCT228ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: PLA07O16, 3'end, expressed in mixture of placenta and immature seed at 10d after anthesis.
FS047074.1:215-234
ATACATTTCACAATACACTTCACTTATTCT215ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: RBW07C20, 3'end, expressed in root at 3w after germination.
FS052685.1:218-237
ATACATTTCACAATACACTTCACTTATTCT218ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: SEP02A10, 3'end, expressed in sepal at 10d after anthesis.
FS058820.1:242-261
ATACATTTCACAATACACTTCACTTATTCT242ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: SEP03F12, 3'end, expressed in sepal at 10d after anthesis.
FS059665.1:173-192
ATACATTTCACAATACACTTCACTTATTCT173ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: SEP04E22, 3'end, expressed in sepal at 10d after anthesis.
FS060289.1:79-98
ATACATTTCACAATACACTTCACTTATTCT79ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: SEP05B02, 3'end, expressed in sepal at 10d after anthesis.
FS060784.1:66-85
ATACATTTCACAATACACTTCACTTATTCT66ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: SEP05B04, 3'end, expressed in sepal at 10d after anthesis.
FS060786.1:214-233
ATACATTTCACAATACACTTCACTTATTCT214ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: SEP05M14, 3'end, expressed in sepal at 10d after anthesis.
FS061249.1:214-233
ATACATTTCACAATACACTTCACTTATTCT214ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: SEP05N01, 3'end, expressed in sepal at 10d after anthesis.
FS061268.1:214-233
ATACATTTCACAATACACTTCACTTATTCT214ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: SEP08C13, 3'end, expressed in sepal at 10d after anthesis.
FS062670.1:215-234
ATACATTTCACAATACACTTCACTTATTCT215ATGCTTCTTTGGGGCTAGAGTAAGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: SEP08E09, 3'end, expressed in sepal at 10d after anthesis.
FS062744.1:214-233
ATACATTTCACAATACACTTCACTTATTCT214ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: SmFL15K16, 3'end.
FS076809.1:227-246
ATACATTTCACAATACACTTCACTTATTCT227ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: SmFL37F08, 3'end.
FS091802.1:232-251
ATACATTTCACAATACACTTCACTTATTCT232ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: SmFL37N08, 3'end.
FS092156.1:232-251
ATACATTTCACAATACACTTCACTTATTCT232ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: YFR02G07, 3'end, expressed in fruit at 2w after anthesis.
FS095278.1:177-196
ATACATTTCACAATACACTTCACTTATTCT177ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: YFR03E01, 3'end, expressed in fruit at 2w after anthesis.
FS095846.1:238-257
ATACATTTCACAATACACTTCACTTATTCT238ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: YFR06H01, 3'end, expressed in fruit at 2w after anthesis.
FS097738.1:239-258
ATACATTTCACAATACACTTCACTTATTCT239ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Sm30PPL02D10 Library from 30 dpa fruit of eggplant cv. PPL Solanum melongena cDNA, mRNA sequence.
JZ717060.1:163-182
GTACATTTCACAATACACTTCACTTATTCT163ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Sm30PPL03A02 Library from 30 dpa fruit of eggplant cv. PPL Solanum melongena cDNA, mRNA sequence.
JZ717093.1:163-182
TTACTTTTCACAATACACTTCACTTATTCT163ATGCTTCTTTGGGGCTAGAGTAGGAAGGCTTGGTGACCCTTCTCAGGAAC
Sm30PPL05G10 Library from 30 dpa fruit of eggplant cv. PPL Solanum melongena cDNA, mRNA sequence.
JZ717256.1:163-182
ATACATTTCACAATACACTTCACTTATTCT163ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Sm30PPL05H01 Library from 30 dpa fruit of eggplant cv. PPL Solanum melongena cDNA, mRNA sequence.
JZ717257.1:163-182
ATACATTTCACAATACACTTCACTTATTCT163ATGCTTCTTTGGGGCTAGAGTAGGAAGGCATGGTGACCCATCTCAAGAAG
Solanum melongena mRNA, clone: CAL02C14, 5'end, expressed in callus at 3d after subculture.
FS008654.1:235-254
CTTCTTGAGATGGGTCACCATGCCTTCCTA235CTCTAGCCCCAAAGAAGCATAGAATAAGTGAAGTGTATTGTGAAATGTAT
Solanum melongena mRNA, clone: SEP03F12, 5'end, expressed in sepal at 10d after anthesis.
FS059664.1:239-258
CTTCTTGAGATGGGTCACCATGCCTTCCTA239CTCTAGCCCCAAAGAAGCATAGAATAAGTGAAGTGTATTGTGAAATGTAT
Solanum melongena mRNA, clone: SEP05M14, 5'end, expressed in sepal at 10d after anthesis.
FS061248.1:207-226
CTTCTTGAGATGGGTCACCATGCCTTCCTA207CTCTAGCCCCAAAGAAGCATAGAATAAGTGAAGTGTATTGTGAAATGTAT
Sm30PPL01G03 Library from 30 dpa fruit of eggplant cv. PPL Solanum melongena cDNA, mRNA sequence.
JZ717015.1:221-240
CTTCTTGAGATGGGTCACCATGCCTTCCTA221CTCTAGCCCCAAAGAAGCATAGAATAAGTGAAGTGTATTGTGAAATGTAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGCTTCTTTGGGGCTAGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGCTTCTTTGGGGCTAGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
3.322 | 3.313 | search_plus_done; http://172.18.8.135:50400/match?q=ATGCTTCTTTGGGGCTAGAG&k=0&no_gap=0&offset=0&limit=50
3.760 | 0.438 | search_minus_done; http://172.18.8.135:50400/match?q=CTCTAGCCCCAAAGAAGCAT&k=0&no_gap=0&offset=0&limit=4
3.763 | 0.003 | cgi_end;

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