GGGenome | Results

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2025-04-06 07:17:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Geotrypetes seraphini genome assembly, chromosome: 4.
LR699149.1:100187852-100187871

TGGTTTAATATTTGTAAAAACAGAAATGAA100187852ATGGAACAAGTGGCAAAAGGTCAACAAGACAAAAAATATGAAACAAAATG

Scyliorhinus canicula genome assembly, chromosome: 17.
LR744046.1:70227000-70227019

GGACAGGACAGATTAAACCACAGAACTGTC70227000ATGGAACAAGTGGCAAAAGGAGTGGTAGTCTGGAATACATCTTAAATGGC

Trachurus trachurus genome assembly, chromosome: 1.
LR991628.1:33779594-33779613

GAAGTTGAAGGGCCAACACTCACAAAATGT33779594CCTTTTGCCACTTGTTCCATTAAAGCTACCTAAAGGACATTTTGTGAGTG

Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:9389453-9389472

GTATCCACCATGTTAAAATAGTTATCGGAG9389453CCTTTTGCCACTTGTTCCATGGAATACTACACACCAAAACAACAGTACTT

Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:15612244-15612263

GTATCCACCATGTTAAAATAGTTATCGGAG15612244CCTTTTGCCACTTGTTCCATGGAATACTACACACCAAAACAACAGTACTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.105 | 0.096 | search_plus_done; http://172.18.8.135:50400/match?q=ATGGAACAAGTGGCAAAAGG&k=0&no_gap=0&offset=0&limit=50
0.139 | 0.033 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTTTGCCACTTGTTCCAT&k=0&no_gap=0&offset=0&limit=48
0.141 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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