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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:59:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CA-H12_01_E10 Coffee SSH library 1 Coffea arabica cDNA, mRNA sequence.
CF588710.1:276-300
TTGATCGACTTGATTGATGAAGAGACTTTG276ATGGAGGGTAGGGTTTCGAGAGTGAGAAGAAGAGCTAGGAAAGGGCCTCGAAGAA
CGN-34162 Leaf Coffea canephora cDNA clone cccl9i8 5', mRNA sequence.
DV690683.1:21-45
CTAGGACCTAGCTCTTCTTC21TCACTCTCGAAACCCTACCCTCCATCAAAATCTCTTCATCAATCAAGTCGATCAA
CGN-37280 Leaf Coffea canephora cDNA clone cccl22o1 5', mRNA sequence.
DV693186.1:4-28
TTC4TCACTCTCGAAACCCTACCCTCCATCAACCTCTATATCATCAATCAAGTCGATCA
CGN-38831 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w11l7 5', mRNA sequence.
DV694357.1:6-30
TCTTC6TCACTCTCGAAACCCTACCCTCCATCAAAATCTCTTCATCAATCAAGTCGATCAA
CGN-45799 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w22g4 5', mRNA sequence.
DV699893.1:137-161
TTCTTCGAGGCCCCTGCCTAGCTCTTCTTC137TCACTCTCGAAACCCTACCCTCCATCAAAATCTCTTCATCAATCAAGTCGATCAA
CGN-50429 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w30l24 5', mRNA sequence.
DV703789.1:16-40
GCCTAGCTCTTCTTC16TCACTCTCGAAACCCTACCCTCCATCAAAATCTCTTCATCAATCAAGTCGATCAA
CGN-50543 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w29f13 5', mRNA sequence.
DV703882.1:163-187
TTCTTCGAGGCCCCTGCCTAGCTCTTCTTC163TCACTCTCGAAACCCTACCCTCCATCAAAATCTCTTCATCAATCAAGTCGATCAA
CGN-62403 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w31a20 5', mRNA sequence.
DV713194.1:21-45
CTAGGACCTAGCTCTTCTTC21TCACTCTCGAAACCCTACCCTCCATCAAAATCTCTTCATCAATCAAGTCGATCAA
CC-F01_019_L22 Cherry of different development stage Coffea canephora cDNA clone CC-F01_019_L22, mRNA sequence.
EE200476.1:130-154
TTCGAGGCCCCTAGGACCTAGCTCTTCTTC130TCACTCTCGAAACCCTACCCTCCATCAAAATCTCTTCATCAATCAAGTCGATCAA
TransId-101452 CACAT45FR Coffea arabica cDNA clone CACAT45FR_35_M15_237.F similar to Symbol: None | oligouridylate-binding protein, putative, similar to oligouridylate binding protein (Nicotiana plumb
GR990731.1:51-75
TTCTTCGAGGCCCTTTCCTAGCTCTTCTTC51TCACTCTCGAAACCCTACCCTCCATCAAAGTCTCTTCATCAATCAAGTCGATCAA
TransId-229275 CAET42MIX Coffea arabica cDNA clone CAET42MIX-CFEV357TV similar to Oligouridylate binding protein-like protein - Solanum tuberosum (Potato), mRNA sequence.
GT005241.1:51-75
TTCTTCGAGGCCCTTTCCTAGCTCTTCTTC51TCACTCTCGAAACCCTACCCTCCATCAAAGTCTCTTCATCAATCAAGTCGATCAA
TransId-229276 CAET42MIX Coffea arabica cDNA clone CAET42MIX-CFEV357TVB similar to Oligouridylate binding protein-like protein - Solanum tuberosum (Potato), mRNA sequence.
GT005242.1:51-75
TTCTTCGAGGCCCTTTCCTAGCTCTTCTTC51TCACTCTCGAAACCCTACCCTCCATCAAAGTCTCTTCATCAATCAAGTCGATCAA
TransId-237087 CAET42MIX Coffea arabica cDNA clone CAET42MIX-CFEXR26TV similar to Oligouridylate binding protein-like protein - Solanum tuberosum (Potato), mRNA sequence.
GT008130.1:51-75
TTCGAGGCCCCTAGGACCTAGCTCTTCTTC51TCACTCTCGAAACCCTACCCTCCATCAAAATCTCTTCATCAATCAAGTCGATCAA
TransId-238935 CAET42MIX Coffea arabica cDNA clone CAET42MIX-CFEYC60TV similar to Oligouridylate binding protein-like protein - Solanum tuberosum (Potato), mRNA sequence.
GT008833.1:51-75
TTCGAGGCCCCTAGGACCTAGCTCTTCTTC51TCACTCTCGAAACCCTACCCTCCATCAAAATCTCTTCATCAATCAAGTCGATCAA
TransId-277784 CarCatBudEnri2 Coffea arabica cDNA clone CarCatBudEnri2_43-A08-PAL17d similar to Oligouridylate binding protein-like protein - Solanum tuberosum (Potato), mRNA sequence.
GT019745.1:51-75
TTCGAGGCCCCTAGGACCTAGCTCTTCTTC51TCACTCTCGAAACCCTACCCTCCATCAAAATCTCTTCATCAATCAAGTCGATCAA
CR00-XX-FV2-064-E01-EM.F Coffea racemosa FV2 Coffea racemosa cDNA clone CR00-XX-FV2-064-E01-EM, mRNA sequence.
GT665678.1:51-75
TTCGTCGAGGCCCTTTCCTAGCTCTTCTTC51TCACTCTCGAAACCCTACCCTCCATCAAAATCTCTTCATCAATCAAGTCGATCAA
CA00-XX-LV5-017-D08-CB.F Coffea arabica LV5 Coffea arabica cDNA clone CA00-XX-LV5-017-D08-CB, mRNA sequence.
GT695986.1:25-49
CACGCGTCCGCCTAGCTCTTCCCC25TCACTCTCGAAACCCTACCCTCCATCAAAATCTCTTCATCAATCAAGTCGATCAA
CA00-XX-FB2-021-G01-BM.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-021-G01-BM, mRNA sequence.
GT702743.1:51-75
TTCTTCGAGGCCCTTTCCTAGCTCTTCTTC51TCACTCTCGAAACCCTACCCTCCATCAAAGTCTCTTCATCAATCAAGTCGATCAA
CA00-XX-FR2-035-A02-EP.F Coffea arabica FR2 Coffea arabica cDNA clone CA00-XX-FR2-035-A02-EP, mRNA sequence.
GT704888.1:43-67
TTCTTCGAGGCCCTTTCCTAGCTCTTCTTC43TCACTCTCGAAACCCTACCCTCCATCAAAGTCTCTTCATCAATCAAGTCGATCAA
CA00-XX-FR2-070-E01-BF.F Coffea arabica FR2 Coffea arabica cDNA clone CA00-XX-FR2-070-E01-BF, mRNA sequence.
GT704889.1:56-80
TTCTTCGAGGCCCTTTCCTAGCTCTTCTTC56TCACTCTCGAAACCCTACCCTCCATCAAAGTCTCTTCATCAATCAAGTCGATCAA
CA00-XX-FB1-129-C10-AG.F Coffea arabica FB1 Coffea arabica cDNA clone CA00-XX-FB1-129-C10-AG, mRNA sequence.
GT708229.1:51-75
TTCGAGGCCCCTAGGACCTAGCTCTTCTTC51TCACTCTCGAAACCCTACCCTCCATCAAAATCTCTTCATCAATCAAGTCGATCAA
CA00-XX-RM1-046-D09-EQ.F Coffea arabica RM1 Coffea arabica cDNA clone CA00-XX-RM1-046-D09-EQ, mRNA sequence.
GT710231.1:51-75
TTCGAGGCCCCTAGGACCTAGCTCTTCTTC51TCACTCTCGAAACCCTACCCTCCATCAAAATCTCTTCATCAATCAAGTCGATCAA
CA00-XX-RM1-005-A05-JM.F Coffea arabica RM1 Coffea arabica cDNA clone CA00-XX-RM1-005-A05-JM, mRNA sequence.
GT710232.1:36-60
TTCGAGGCCCCTAGGACCTAGCTCTTCTTC36TCACTCTCGAAACCCTACCCTCCATCAAAATCTCTTCATCAATCAAGTCGATCAA
CA00-XX-LV9-006-E12-SB.F Coffea arabica LV9 Coffea arabica cDNA clone CA00-XX-LV9-006-E12-SB, mRNA sequence.
GT711273.1:48-72
TTCGAGGCCCCTAGGACCTAGCTCTTCTTC48TCACTCTCGAAACCCTACCCTCCATCAAAATCTCTTCATCAATCAAGTCGATCAA
CA00-XX-FR1-068-A11-JE.F Coffea arabica FR1 Coffea arabica cDNA clone CA00-XX-FR1-068-A11-JE, mRNA sequence.
GT714088.1:51-75
TTCTTCGAGGCCCTTTCCTAGCTCTTCTCC51TCACTCTCGAAACCCTACCCTCCATCAAAGTCTCTTCATCAATCAAGTCGATCAA
CA00-XX-FR1-037-C10-CE.F Coffea arabica FR1 Coffea arabica cDNA clone CA00-XX-FR1-037-C10-CE, mRNA sequence.
GT714089.1:51-75
TTCTTCGAGGCCCTTTCCTAGCTCTTCTTC51TCACTCTCGAAACCCTACCCTCCATCAAAGTCTCTTCATCAATCAAGTCGATCAA
CA00-XX-FR1-032-D07-AC.F Coffea arabica FR1 Coffea arabica cDNA clone CA00-XX-FR1-032-D07-AC, mRNA sequence.
GT714090.1:69-93
TTCTTCGAGGCCCTTTCCTAGCTCTTCTTC69TCACTCTCGAAACCCTACCCTCCATCAAAGTCTCTTCATCAATCAAGTCGATCAA
CA00-XX-FR1-073-B06-AG.F Coffea arabica FR1 Coffea arabica cDNA clone CA00-XX-FR1-073-B06-AG, mRNA sequence.
GT714091.1:68-92
TTCTTCGAGGCCCTTTCCTAGCTCTTCTTC68TCACTCTCGAAACCCTACCCTCCATCAAAGTCTCTTCATCAATCAAGTCGATCAA
CA00-XX-SH2-038-C06-EM.F Coffea arabica SH2 Coffea arabica cDNA clone CA00-XX-SH2-038-C06-EM, mRNA sequence.
GT716748.1:51-75
TTCTTCGAGGCCCTTTCCTAGCTCTTCTTC51TCACTCTCGAAACCCTACCCTCCATCAAAGTCTCTTCATCAATCAAGTCGATCAA
CA00-XX-SH2-037-H11-EM.F Coffea arabica SH2 Coffea arabica cDNA clone CA00-XX-SH2-037-H11-EM, mRNA sequence.
GT716749.1:51-75
TTCTTCGAGGCCCTTTCCTAGCTCTTCTTC51TCACTCTCGAAACCCTACCCTCCATCAAAGTCTCTTCATCAATCAAGTCGATCAA
CA00-XX-SI3-095-G07-EM.F Coffea arabica SI3 Coffea arabica cDNA clone CA00-XX-SI3-095-G07-EM, mRNA sequence.
GT719021.1:51-75
TTCGAGGCCCCTAGGACCTAGCTCTTCTTC51TCACTCTCGAAACCCTACCCTCCATCAAAATCTCTTCATCAATCAAGTCGATCAA
CA00-XX-SI3-084-C03-EM.F Coffea arabica SI3 Coffea arabica cDNA clone CA00-XX-SI3-084-C03-EM, mRNA sequence.
GT719022.1:51-75
TTCTTCGAGGCCCTTTCCTAGCTCTTCTTC51TCACTCTCGAAACCCTACCCTCCATCAAAGTCTCTTCATCAATCAAGTCGATCAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGGAGGGTAGGGTTTCGAGAGTGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGGAGGGTAGGGTTTCGAGAGTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.192 | 0.183 | search_plus_done; http://172.18.8.135:50400/match?q=ATGGAGGGTAGGGTTTCGAGAGTGA&k=0&no_gap=0&offset=0&limit=50
2.494 | 2.302 | search_minus_done; http://172.18.8.135:50400/match?q=TCACTCTCGAAACCCTACCCTCCAT&k=0&no_gap=0&offset=0&limit=49
2.514 | 0.020 | cgi_end;

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