GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 13:59:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:8556950-8556976
GATTCCATTCCGAGACGTCACACGGTTCTT8556950ATGGATCCAAAGGACCACAAGCTAACCCTTTTTTGATATCTATACCTGTACACTGCA
Capsicum annuum Takanotsume DNA, chromosome 1, sequence.
AP026696.1:268654921-268654947
TACAGTGTACAGGTACAGATATAAGTAAAA268654921GGTTAGCTTGTGGTCCTTTGGATCCATAAGCATCGTGTGACGTCTCAAGATGGGATC
Capsicum annuum Takanotsume DNA, chromosome 5, sequence.
AP026700.1:113199903-113199929
TGTAGTGTACAGGTACAGATATCAGAAAAG113199903GGTTAGCTTGTGGTCCTTTGGATCCATAAGCACCGTGTGACGTCTCGGGATGGGATC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:246577546-246577572
TGTAGTGTACAGGTACAGATATCAGAAAAG246577546GGTTAGCTTGTGGTCCTTTGGATCCATAAGAACCGTGTGACGTCTCGGAATGGGATC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 5.
CP124727.1:112976818-112976844
TGTAGTGTACAGGTACAGATATCAGAAAAG112976818GGTTAGCTTGTGGTCCTTTGGATCCATAAGCACCGTGTGACGTCTCGGGATGGGATC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 1.
CP124731.1:268562217-268562243
TACAGTGTACAGGTACAGATATAAGTAAAA268562217GGTTAGCTTGTGGTCCTTTGGATCCATAAGCATCGTGTGACGTCTCAAGATGGGATC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATGGATCCAAAGGACCACAAGCTAACC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGGATCCAAAGGACCACAAGCTAACC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.105 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=ATGGATCCAAAGGACCACAAGCTAACC&k=0&no_gap=0&offset=0&limit=50
0.124 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=GGTTAGCTTGTGGTCCTTTGGATCCAT&k=0&no_gap=0&offset=0&limit=49
0.127 | 0.003 | cgi_end;

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