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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:55:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Mdfw2012p20.y1 Mdfw Malus domestica cDNA clone Mdfw2012p20 5' similar to TR:Q9SFP5 Q9SFP5 PUTATIVE S-ADENOSYL-METHIONINE-STEROL-C-METHYLTRANSFERASE, 5' PARTIAL, mRNA sequence.
CN493200.1:33-52
AGTTCTTGGATAATGTTCAGTACAAAAATA33ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
Mdfrt3075c04.y1 Mdfrt Malus domestica cDNA clone Mdfrt3075c04 5' similar to TR:Q9SFP5 Q9SFP5 PUTATIVE S-ADENOSYL-METHIONINE-STEROL-C-METHYLTRANSFERASE, 5' PARTIAL, mRNA sequence.
CV084662.1:75-94
AGTTCTTGGATAATGTTCAGTACAAAAATA75ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
Mdfrt3079l04.y1 Mdfrt Malus domestica cDNA clone Mdfrt3079l04 5' similar to TR:Q9SFP5 Q9SFP5 PUTATIVE S-ADENOSYL-METHIONINE-STEROL-C-METHYLTRANSFERASE, 5' PARTIAL, mRNA sequence.
CV085895.1:75-94
AGTTCTTGGATAATGTTCAGTACAAAAATA75ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
000321AFBC001809HT (AFBC) Royal Gala pre-opened floral bud Malus domestica cDNA clone AFBC001809, mRNA sequence.
EB109057.1:32-51
AGTTCTTGGATAATGTTCAGTACAAAAATA32ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
000430AFBC008096HT (AFBC) Royal Gala pre-opened floral bud Malus domestica cDNA clone AFBC008096, mRNA sequence.
EB110410.1:32-51
AGTTCTTGGATAATGTTCAGTACAAAAATA32ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
010813AASB005816HT (AASB) Royal Gala 10 DAFB fruit Malus domestica cDNA clone AASB005816, mRNA sequence.
EB141556.1:645-664
AGTTCTTGGATAATGTTCAGTACAAAAATA645ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTG
CATW2005.fwd CATW Aspergillus niger Pelleted fungal cells pooled from 1, 2, 3, 4, and 5 days cultures in citric acid production medium Aspergillus niger cDNA clone CATW2005 5', mRNA sequence.
EY224805.1:447-466
GCACTATCGATTTATGCCTGAAATTTGGTC447ATGGCATACTACGATATGAGAAACGAACAATCACCCAACGCTTTTCAGTA
fl_06F12_BH6 Md_fruit-leaf_subtractive_cDNA_library Malus domestica cDNA, mRNA sequence.
GD254948.1:10-29
ACAAAAATA10ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
Mdrtc1030N01.g1 Apple_EST_Mdrtc Malus hybrid rootstock cDNA 5' similar to ref|NP_177501.1| phosphoethanolamine N-methyltransferase -related [Arabidopsis thaliana] pir|H96762 hypothetical protein F6D5.
GO501558.1:299-318
AGTTCTTGGATAATGTTCAGTACAAAAATA299ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
Mdfrfu3513H14.g1 Apple_EST_Mdfrfu Malus domestica cDNA 5' similar to ref|NP_177501.1| phosphoethanolamine N-methyltransferase -related [Arabidopsis thaliana] pir|H96762 hypothetical protein F6D5.1 [im
GO535673.1:128-147
AGTTCTTGGATAATGTTCAGTACAAAAATA128ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
Mdfrfu3509B18.g1 Apple_EST_Mdfrfu Malus domestica cDNA 5' similar to ref|NP_175293.1| phosphoethanolamine N-methyltransferase -related [Arabidopsis thaliana] sp|Q944H0|PEM2_ARATH Putative phosphoethan
GO536054.1:53-72
AGTTCTTGGATAATGTTCAGTACAAAAATA53ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
Mdfrjg3501C20.g2 Apple_EST_Mdfrjg Malus domestica cDNA 5' similar to ref|NP_177501.1| phosphoethanolamine N-methyltransferase -related [Arabidopsis thaliana] pir|H96762 hypothetical protein F6D5.1 [im
GO539870.1:286-305
AGTTCTTGGATAATGTTCAGTACAAAAATA286ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
Mdfrjg3502O24.g2 Apple_EST_Mdfrjg Malus domestica cDNA 5' similar to ref|NP_177501.1| phosphoethanolamine N-methyltransferase -related [Arabidopsis thaliana] pir|H96762 hypothetical protein F6D5.1 [im
GO540428.1:51-70
CCTTTTTGGATAATGTTCAGTACAAAAATA51ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
Mdfrjg3502P01.g2 Apple_EST_Mdfrjg Malus domestica cDNA 5' similar to ref|NP_177501.1| phosphoethanolamine N-methyltransferase -related [Arabidopsis thaliana] pir|H96762 hypothetical protein F6D5.1 [im
GO540429.1:217-236
AGTTCTTGGATAATGTTCAGTACAAAAATA217ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
Mdfrjg3502P08.g2 Apple_EST_Mdfrjg Malus domestica cDNA 5' similar to ref|NP_177501.1| phosphoethanolamine N-methyltransferase -related [Arabidopsis thaliana] pir|H96762 hypothetical protein F6D5.1 [im
GO540436.1:356-375
AGTTCTTGGATAATGTTCAGTACAAAAATA356ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
Pyrus pyrifolia mRNA, clone: NFR1_19_82, 5' end sequence, expressed in fruit.
HX747248.1:207-226
AGTTCTTGGATAATGTTCAGTACAAAAATA207ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
Pyrus pyrifolia mRNA, clone: NFR3_21_57, 5' end sequence, expressed in fruit.
HX752934.1:306-325
GGTTCTTGGATAATGTTCAGTACAAAAATA306ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
TSA: Pyrus pyrifolia mRNA, contig: contig_370revcomp.
FX411141.1:632-651
GGTTCTTGGATAATGTTCAGTACAAAAATA632ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
TSA: Pyrus x bretschneideri Unigene87776_XinShao mRNA sequence.
JR671549.1:198-217
AGTTCTTGGATAATGTTCAGTACAAAAATA198ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
Aspergillus niger clone AXAS145-G07, complete sequence.
AC253933.1:11980-11999
GCACTATCGATTTATGCCTGAAATTTGGTC11980ATGGCATACTACGATATGAGAAACGAACAATCACCCAACGCTTTTCAGTA
Malus hybrid cultivar cultivar Flame chromosome 14.
CP141923.1:1021080-1021099
AGTTCTTGGATAATGTTCAGTACAAAAATA1021080ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
Malus hybrid cultivar cultivar Flame chromosome 14.
CP141940.1:977908-977927
AGTTCTTGGATAATGTTCAGTACAAAAATA977908ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
Malus hybrid cultivar cultivar Royalty chromosome 14.
CP141966.1:1028346-1028365
AGTTCTTGGATAATGTTCAGTACAAAAATA1028346ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
Malus hybrid cultivar cultivar Royalty chromosome 14.
CP141983.1:1008894-1008913
AGTTCTTGGATAATGTTCAGTACAAAAATA1008894ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
Pyrus betulifolia phosphoethanolamine N-methyltransferase mRNA, complete cds.
JF968605.1:749-768
AGTTCTTGGATAATGTTCAGTACAAAAATA749ATGGCATACTACGATATGAGCGTGTCTTTGGGCTAGGTTTCGTGAGCACA
Pyrus betulifolia phosphoethanolamine N-methyltransferase gene, complete cds.
JF968606.1:2202-2221
AGTTCTTGGATAATGTTCAGTACAAAAATA2202ATGGCATACTACGATATGAGCGTGTCTTTGGGCTAGGTTTCGTGAGCACA
Malus x robusta genome assembly, chromosome: 15.
OY720339.1:921166-921185
AGTTCTTGGATAATGTTCAGTACAAAAATA921166ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
Crataegus laevigata genome assembly, chromosome: 7.
OY756944.1:28786722-28786741
AGTTCTTAGATAATGTTCAGTATAAAAATA28786722ATGGCATACTACGATATGAGCGTGTCTTTGGGCAAGGTTTCGTGAGCACA
Crataegus laevigata genome assembly, chromosome: 16.
OY756953.1:1053643-1053662
AGTTCTTGGATAATGTTCAGTACAAAAATA1053643ATGGCATACTACGATATGAGCGTGTCTTTGGGCGAGGTTTCGTGAGCACA
Malus hybrid cultivar cultivar SH6 chromosome 14.
CP143371.1:30854672-30854691
TGTGCTCACGAAACCTCGCCCAAAGACACG30854672CTCATATCGTAGTATGCCATTATTTTTGTACTGAACATTATCCAAGAACT
Malus hybrid cultivar cultivar SH6 chromosome 14.
CP143388.1:27165745-27165764
TGTGCTCACAAAACCTCGCCCAAAGACACG27165745CTCATATCGTAGTATGCCATTATTTTTGTACTGAACATTATCCAAGAACT
Malus sylvestris genome assembly, chromosome: 14.
OU696516.1:29352084-29352103
TGTGCTCACGAAACCTCGCCCAAAGACACG29352084CTCATATCGTAGTATGCCATTATTTTTGTACTGAACATTATCCAAGAACT
Malus domestica genome assembly, chromosome: 14.
OU696690.1:30602823-30602842
TGTGCTCACGAAACCTCGCCCAAAGACACG30602823CTCATATCGTAGTATGCCATTATTTTTGTACTGAACATTATCCAAGAACT
Malus domestica genome assembly, chromosome: 14.
OU744555.1:31275294-31275313
TGTGCTCACGAAACCTCGCCCAAAGACACG31275294CTCATATCGTAGTATGCCATTATTTTTGTACTGAACATTATCCAAGAACT
Malus domestica genome assembly, chromosome: 14.
OU744966.1:31397843-31397862
TGTGCTCACGAAACCTCGCCCAAAGACACG31397843CTCATATCGTAGTATGCCATTATTTTTGTACTGAACATTATCCAAGAACT
Malus domestica genome assembly, chromosome: 14.
OU745004.1:31296610-31296629
TGTGCTCACGAAACCTCGCCCAAAGACACG31296610CTCATATCGTAGTATGCCATTATTTTTGTACTGAACATTATCCAAGAACT
Pyrus communis genome assembly, chromosome: 13.
OY757080.1:25182147-25182166
TGTGCTCACGAAACCTCGCCCAAAGACACG25182147CTCATATCGTAGTATGCCATTATTTTTGTACTGAACATTATCCAAGAACT
Potentilla sterilis genome assembly, chromosome: 7.
OY821760.1:50129103-50129122
TGTGCTCACAAATCCCCGTCCAAAGACACG50129103CTCATATCGTAGTATGCCATTACTCTTATACTGGACATTATCTAAGAACT
Potentilla sterilis genome assembly, chromosome: 12.
OY821765.1:41636906-41636925
TGTGCTCACAAATCCCCGTCCAAAGACACG41636906CTCATATCGTAGTATGCCATTACTCTTATACTGGACATTATCTAAGAACT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGGCATACTACGATATGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGGCATACTACGATATGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.456 | 1.448 | search_plus_done; http://172.18.8.135:50400/match?q=ATGGCATACTACGATATGAG&k=0&no_gap=0&offset=0&limit=50
1.573 | 0.117 | search_minus_done; http://172.18.8.135:50400/match?q=CTCATATCGTAGTATGCCAT&k=0&no_gap=0&offset=0&limit=21
1.580 | 0.006 | cgi_end;

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