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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2026-02-27 22:48:35, GGGenome : DDBJ release 138.0 (Jun, 2025)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

010425AASA006454HT (AASA) Royal Gala 10 DAFB fruit Malus domestica cDNA clone AASA006454, mRNA sequence.
CN878934.1:15-33
CTCAAGCTTCATCC15ATGGCGTCACTGATACTCGGAGCTCCACCAGCCCCCCCTCAATCGCTCG
010417AASA002542HT (AASA) Royal Gala 10 DAFB fruit Malus domestica cDNA clone AASA002542, mRNA sequence.
CN880465.1:13-31
CAAGCTCCGGCC13ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCAGTCGCATG
010715ABBA001302HT (ABBA) Pacific Rose spur buds from OFF trees Malus domestica cDNA clone ABBA001302, mRNA sequence.
CN900491.1:66-84
TTATCTGCTTCTCCTCCTCAAGCTCCGGCC66ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCAGTCGCATG
020613ABKA001118HT (ABKA) Royal Gala temperature stressed leaves Malus domestica cDNA clone ABKA001118, mRNA sequence.
CN907010.1:56-74
TTATCTGCTTCTCCTCCTCAAGCTCCGGCC56ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCAGTCGCATG
010917AVBC040036PG (AVBC) Royal Gala young shoot Malus domestica cDNA clone AVBC040036, mRNA sequence.
CN941387.1:42-60
TTATCCGATTATTCTCCTCAAGCTTCATCC42ATGGCGTCACTGATACTCGGAGCTCCACCAGCCCCCCCTCAATCGCTCG
010921AVBC075006PG (AVBC) Royal Gala young shoot Malus domestica cDNA clone AVBC075006, mRNA sequence.
CN942705.1:50-68
TTATCTGCTTCTCCTCCTCAAGCTCCGGCC50ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCAGTCGCATG
020805AVBC012244HT (AVBC) Royal Gala young shoot Malus domestica cDNA clone AVBC012244, mRNA sequence.
CN948020.1:65-83
TTATCTGCTTCTCCTCCTCAAGCTCCGGCC65ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCAGTCGCATG
Mddb5015d18.y1 Mddb Malus domestica cDNA clone Mddb5015d18 5' similar to TR:O80439 O80439 PUTATIVE RIBOSOMAL PROTEIN S31, mRNA sequence.
CO865355.1:48-66
TTATCCGATTATTCTCCTCAAGCTTCATCC48ATGGCGTCACTGATACTCGGAGCTCCACCAGCCCCCCCTCAATCGCTCG
Mddb5027i09.y1 Mddb Malus domestica cDNA clone Mddb5027i09 5' similar to TR:O80439 O80439 PUTATIVE RIBOSOMAL PROTEIN S31, mRNA sequence.
CV084146.1:65-83
TTATCCGATTATTCTCCTCAAGCTTCATCC65ATGGCGTCACTGATACTCGGAGCTCCACCAGCCCCCCCTCAATCGCTCG
Mdfrt3086j04.y1 Mdfrt Malus domestica cDNA clone Mdfrt3086j04 5' similar to TR:O80439 O80439 PUTATIVE RIBOSOMAL PROTEIN S31, mRNA sequence.
CV129867.1:47-65
TTATCCGATTATTCTCCTCAAGCTTCATCC47ATGGCGTCACTGATACTCGGAGCTCCACCAGCCCCCCCTCAATCGCTCG
Mdfrt3095k18.y2 Mdfrt Malus domestica cDNA clone Mdfrt3095k18 5' similar to TR:O80439 O80439 PUTATIVE RIBOSOMAL PROTEIN S31, mRNA sequence.
CV466123.1:47-65
TTATCCGATTATTCTCCTCAAGCTTCATCC47ATGGCGTCACTGATACTCGGAGCTCCACCAGCCCCCCCTCAATCGCTCG
Mdlv4-4043g22.y1 Mdlv4 Malus domestica cDNA clone Mdlv4-4043g22 5' similar to TR:O80439 O80439 PUTATIVE RIBOSOMAL PROTEIN S31, mRNA sequence.
CX025178.1:55-73
TTATCTGCTTCTCCTCCTCAAGCTCCGGCC55ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCAGTCGCATG
PPL-20-A01 Prunus persica L. leaf tissue, Plum Pox Virus infected Prunus persica cDNA, mRNA sequence.
DN555684.1:37-55
CTCTCAAGCGTCAAGCTTCAAGCTTCAACC37ATGGCGTCACTGATACTCGGAGCTCTTCCAATCCCCACTCAAACGCTCA
Pbzs207 SSH cDNA library of pear cv. Zaosu inoculated with Venturia nashicola Pyrus x bretschneideri cDNA, mRNA sequence.
GR957654.1:64-82
TTATCCGCTTATTCTCCTCAAGCTTCATCC64ATGGCGTCACTGATACTCGGAGCTCCCCCGGCCCCCTCTCAGTCGCTCG
Pbzs476 SSH cDNA library of pear cv. Zaosu inoculated with Venturia nashicola Pyrus x bretschneideri cDNA, mRNA sequence.
GR957715.1:64-82
TTATCCGCTTATTCTCCTCAAGCTTCATCC64ATGGCGTCACTGATACTCGGAGCTCCCCCGGCCCCCTCTCAGTCGCTCG
Pbzs485 SSH cDNA library of pear cv. Zaosu inoculated with Venturia nashicola Pyrus x bretschneideri cDNA, mRNA sequence.
GR957718.1:64-82
TTATCCGCTTATTCTCCTCAAGCTTCATCC64ATGGCGTCACTGATACTCGGAGCTCCCCCGGCCCCCTCTCAGTCGCTCG
Prunus avium EST, clone WZ0APVCA27YN01FM1.
HE641925.1:57-75
TCCGCTTCTCTCAAGCTTCAAGCGTCAACC57ATGGCGTCACTGATACTCGGAGCTCTTCCAATCCCCACTCAAACGCTCG
Prunus avium EST, clone WZ0APVCA11YD23FM1.
HE643091.1:78-96
TCCGCTTCTCTCAAGCTTCAAGCGTCAACC78ATGGCGTCACTGATACTCGGAGCTCTTCCAATCCCCACTCAAACGCTCG
Prunus avium EST, clone WZ0APVCA20YD21FM1.
HE646205.1:79-97
TCCGCTTCTCTCAAGCTTCAAGCGTCAACC79ATGGCGTCACTGATACTCGGAGCTCTTCCAATCCCCACTCAAACGCTCG
TSA: Pyrus pyrifolia mRNA, contig: contig_16557.
FX400188.1:41-59
TTATCCGCTTCTTCTCCTCAAGCTCCGGCC41ATGGCGTCACTGATACTCGGAGCTCCCCCGGCCCCCTCTCAGTCGCTCG
TSA: Pyrus communis mRNA, contig: lc1934.
FX610521.1:51-69
TTATCCGCTTCTTCTCCTCAAGCTCCGGCC51ATGGCGTCACTGATACTCGGAGCTCCCCCGGCCCCCTCTCAGTCGCTCG
TSA: Pyrus communis mRNA, contig: lc2118.
FX610705.1:53-71
TTATCCGATTATTCTCCTCAAGCTTCATCC53ATGGCGTCACTGATACTCGGAGCTCCACCAGCCCCCTCTCAATCGCTCG
TSA: Pyrus communis mRNA, contig: lc7377.
FX615962.1:51-69
TTATCCGCTTATTCTCCTCAAGCTTCATCC51ATGGCGTCACTGATACTCGGAGCTCCACCAGCCCCCTCTCAATCGCTCG
TSA: Pyrus communis mRNA, contig: lc36425.
FX644097.1:32-50
TTATCCGCTTCTTCTCCTCAAGCTCCGGCC32ATGGCGTCACTGATACTCGGAGCTCCCCTGGCCCCCTCTCAGTCGCTCG
TSA: Pyrus communis mRNA, contig: lc42309.
FX649368.1:31-49
TTNTCCGATTATTCTCCTCAAGCTTCATCC31ATGGCGTCACTGATACTCGGAGCTCCACCAGNTCAATCGCTCGACTTTA
TSA: Pyrus x bretschneideri Unigene77439_XinShao mRNA sequence.
JR662452.1:123-141
TTATCCGCTTCTTCTCCTCAAGCTCTGGCC123ATGGCGTCACTGATACTCGGAGCTCCCCCGGCCCCCTCTCAGTCGCTCG
Prunus dulcis DNA, pseudomolecule Pd06.
AP019302.1:23632934-23632952
TCCGCTTCTCTCAAGCGTCAAGCTTCAACC23632934ATGGCGTCACTGATACTCGGAGCTCTTCCAATCCCCACTCAAACGCTCA
Prunus speciosa IZO01 DNA, chromosome 6, sequence.
AP029594.1:28083515-28083533
TCCGCTTCTCTCAAGCTTCAAGCTTCAACC28083515ATGGCGTCACTGATACTCGGAGCTCTTCCAATCCCCACTCAAACGCTCG
Prunus speciosa IZO01 DNA, chromosome 6.
AP038360.1:27598238-27598256
TCCGCTTCTCTCAAGCTTCAAGCTTCAACC27598238ATGGCGTCACTGATACTCGGAGCTCTTCCAATCCCCACTCAAACGCTCG
Prunus speciosa IZO01 DNA, chromosome 3.
AP038365.1:26203402-26203420
TCCGCTTCTCTCAAGCTTCAAGCTTCAACC26203402ATGGCGTCACTGATACTCGGAGCTCTTCCAATCCCCACTCAAACGCTCG
Prunus speciosa IZO01 DNA, chromosome 6.
AP038368.1:27806010-27806028
TCCGCTTCTCTCAAGCTTCAAGCTTCAACC27806010ATGGCGTCACTGATACTCGGAGCTCTTCCAATCCCCACTCAAACGCTCG
Malus hybrid cultivar cultivar Flame chromosome 4.
CP141913.1:22186089-22186107
TTATCTGCTTCTCCTCCTCAAGCTCCGGCC22186089ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCACCTCTCAGTCGCTTG
Malus hybrid cultivar cultivar Flame chromosome 4.
CP141930.1:23112700-23112718
TTATCTGCTTCTCCTCCTCAAGCTCCGGCC23112700ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCAGTCGCATG
Malus hybrid cultivar cultivar Royalty chromosome 4.
CP141956.1:22115506-22115524
TTATCTGCTTCTCCTCCTCAAGCTCCGGCC22115506ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCACCTCTCAGTCGCTTG
Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141964.1:23457922-23457940
TTATCCGATTATTCTCCTCAAGCTTCATCC23457922ATGGCGTCACTGATACTCGGAGCTCCACCAGCCCCCTCTCAATCGCTCG
Malus hybrid cultivar cultivar Royalty chromosome 4.
CP141973.1:21446643-21446661
TTATCTGCTTCTCCTCCTCAAGCTCCGGCC21446643ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCAGTCGCTTG
Malus hybrid cultivar cultivar SH6 chromosome 4.
CP143361.1:22590498-22590516
TTATCTGCTTCTCCTCCTCAAGCTCCGGCC22590498ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCAGTCGCTTG
Malus hybrid cultivar cultivar SH6 chromosome 4.
CP143378.1:21444303-21444321
TTATCTGCTTCTTCTCCTCAAGCTCCGGCC21444303ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCAGTCGCTTG
Malus hybrid cultivar cultivar SH6 chromosome 12.
CP143386.1:22139556-22139574
TTATCCGATTATTCTCCTCAAGCTTCATCC22139556ATGGCGTCACTGATACTCGGAGCTCCACCAGCCCCCTCTCTATCGCTCG
Malus domestica cultivar Red Fuji chromosome 4.
CP147796.1:23179107-23179125
TTATCTGCTTCTCCTCCTCAAGCTCCGGCC23179107ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCAGTCGCTTG
Malus domestica cultivar Red Fuji chromosome 4.
CP147821.1:22580399-22580417
TTATCTGCTTCTCCTCCTCAAGCTCCGGCC22580399ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCAGTCGCATG
Malus ioensis cultivar PI590015 chromosome 4.
CP154727.1:26103993-26104011
TTATCCGCTTCTTCTCCTCAAGCTCCGGCC26103993ATGGCGTCACTGATACTCGGAGCTCCCTCAGCCCCCTCTCAGTCGCTTG
Malus ioensis cultivar PI590015 chromosome 12.
CP154735.1:22314779-22314797
TTATCCGATTATTATCCTCAAGCTTCATCC22314779ATGGCGTCACTGATACTCGGAGCTCCACCAGCCCCCTCTCAATCGCTCG
Malus ioensis cultivar PI590015 chromosome 4.
CP154744.1:26158901-26158919
TTATCCGCTTCTTATCCTCAAGCTCCGGCC26158901ATGGCGTCACTGATACTCGGAGCTCCCTCAGCCCCCTCTCAGTCGCTTG
Malus ioensis cultivar PI590015 chromosome 12.
CP154752.1:23379901-23379919
TTATCCGATTATTATCCTCAAGCTTCATCC23379901ATGGCGTCACTGATACTCGGAGCTCCACCAGCCCCCTCTCAATCGCTCG
Malus coronaria cultivar PI590014 chromosome 4.
CP154761.1:25529523-25529541
TTATCCGCTTCTTCTCCTCAAGCTCCGGCC25529523ATGGCGTCACTGATACTCGGAGCTCCCTCAGCCCCCTCTCAGTCGCTTG
Malus coronaria cultivar PI590014 chromosome 12.
CP154769.1:26570731-26570749
TTATCCGATTATTCTCCTCAAACTTCATCC26570731ATGGCGTCACTGATACTCGGAGCTCCACCAGCCCCCTCTCAATCGCTCG
Malus coronaria cultivar PI590014 chromosome 4.
CP154778.1:24395209-24395227
TTATCCGCTTCTTCTCCTCAAGCTCCGGCC24395209ATGGCGTCACTGATACTCGGAGCTCCCTCAGCCCCCTCTCAGTCGCTTG
Malus coronaria cultivar PI590014 chromosome 12.
CP154786.1:25352059-25352077
TTATCCGATTATTATCCTCAAGCTTCATCC25352059ATGGCGTCACTGATACTCGGAGCTCCACCAGCCCCCTCTCAATCGCTCG
Malus domestica cultivar WA 38 chromosome 4B.
CP165687.1:22985342-22985360
TTATCTGCTTCTCCTCCTCAAGCTCCGGCC22985342ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCAGTCGCATG
Malus domestica cultivar WA 38 chromosome 12B.
CP165695.1:23440875-23440893
TTATCCGATTATTCTCCTCAAGCTTCATCC23440875ATGGCGTCACTGATACTCGGAGCTCCACCAGCCCCCCCTCAATCGCTCG
Malus domestica cultivar WA 38 chromosome 4A.
CP165704.1:21780959-21780977
TTATCTGCTTCTCCTCCTCAAGCTCCGGCC21780959ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCAGTCGCATG
Malus domestica cultivar Golden Delicious chromosome 04.
CP168768.1:23462475-23462493
TTATCTGCTTCTCCTCCTCAAGCTCCGGCC23462475ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCAGTCGCATG
Malus domestica cultivar Golden Delicious chromosome 12.
CP168776.1:23723408-23723426
TTATCCGATTATTCTCCTCAAGCTTCATCC23723408ATGGCGTCACTGATACTCGGAGCTCCACCAGCCCCCCCTCAATCGCTCG
Malus domestica cultivar Golden Delicious chromosome 04.
CP168785.1:23304569-23304587
TTATCTGCTTCTCCTCCTCAAGCTCCGGCC23304569ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCAGTCGCATG
Malus domestica cultivar Golden Delicious chromosome 12.
CP168793.1:23527818-23527836
TTATCCGATTATTCTCCTCAAGCTTCATCC23527818ATGGCGTCACTGATACTCGGAGCTCCACCAGCCCCCCCTCAATCGCTCG
Malus baccata partial s31 gene for Putative 30S ribosomal protein, exons 1-3.
LM999992.1:1-19
1ATGGCGTCACTGATACTCGGAGCTCCACCAGCCCCCCCTCAATCGCTCG
Malus sylvestris genome assembly, chromosome: 4.
OU696506.1:22607765-22607783
TTATCTGCTTCTCCTCCTCAAGCTCCGGCC22607765ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCAGTCGCTTG
Malus domestica genome assembly, chromosome: 4.
OU744545.1:22832603-22832621
TTATCTGCTTCTCCTCCTCAAGCTCCGGCC22832603ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCAGTCGCTTG
Malus domestica genome assembly, chromosome: 4.
OU744956.1:23098433-23098451
TTATCTGCTTCTCCTCCTCAAGCTCCGGCC23098433ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCAGTCGCTTG
Malus domestica genome assembly, chromosome: 4.
OU744994.1:22921160-22921178
TTATCTGCTTCTCCTCCTCAAGCTCCGGCC22921160ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCAGTCGCTTG
Malus domestica genome assembly, chromosome: 12.
OU745002.1:23048776-23048794
TTATCCGATTATTCTCCTCAAGCTTCATCC23048776ATGGCGTCACTGATACTCGGAGCTCCACCAGCCCCCCCTCAATCGCTCG
Geum urbanum genome assembly, chromosome: 3.
OX326999.1:73668604-73668622
CTCTCTCCGGAGCTTCATAGCTTTTCAGCT73668604ATGGCGTCACTGATACTCGGAGCTCTCCCTATCCCCACACAATCCCTCG
Geum urbanum genome assembly, chromosome: 7.
OX327003.1:33825829-33825847
CTCTCCCCAGAGCTTCATAGCTTTTCAGCT33825829ATGGCGTCACTGATACTCGGAGCTCTCCCTATCCCCACACAATCCCTCG
Crataegus laevigata genome assembly, chromosome: 1.
OY756938.1:35850932-35850950
TTATCCGCTTCTTCTCCTCAAGCTCCGGCC35850932ATGGCGTCACTGATACTCGGAGCTCCCCCAGCCCCCTCTCTGTCGCTCG
Pyrus communis genome assembly, chromosome: 17.
OY757084.1:15206178-15206196
TTATCCGCTTCTTCTCCTCAAGCTCCGGCC15206178ATGGCGTCACTGATACTCGGTGCTCCCCCGGCCCCCTCTCAGTCGCTCG
Prunus dulcis genome assembly, chromosome: 6.
OZ022202.1:27170334-27170352
TCCGCTTCTCTCAAGCGTCAAGCTTCAACC27170334ATGGCGTCACTGATACTCGGAGCTCTTCCAATCCCCACTCAAACGCTCA
Prunus dulcis genome assembly, chromosome: 6.
OZ022211.1:27257273-27257291
TCCGCTTCTCTCAAGCGTCAAGCTTCAACC27257273ATGGCGTCACTGATACTCGGAGCTCTTCCAATCCCCACTCAAACGCTCA
Prunus armeniaca genome assembly, chromosome: 6.
OZ046365.2:22634236-22634254
CTCTCAAGCGTCAAGCTTCAAGCTTCAACC22634236ATGGCGTCACTGATACTCGGAGCTCTTCCAATCCCCACTCAAACGCTCA
Prunus padus genome assembly, chromosome: 2.
OZ060512.1:27739567-27739585
CGAAAACCTTATCCGCTTCAAGCTTCAACC27739567ATGGCGTCACTGATACTCGGAGCTCTCCCAATCCCCACTCAAACCCTCG
Prunus padus genome assembly, chromosome: 4.
OZ060514.1:25094128-25094146
TCCGCTTCTCTCAAGCTTCAAGCTTCAACC25094128ATGGCGTCACTGATACTCGGACCTCTCCCAAGAATAAATTCAAGTATTG
Prunus padus genome assembly, chromosome: 4.
OZ060514.1:25095392-25095410
TCCGCTTCTCTCAAGCTTCAAGCTTCAACC25095392ATGGCGTCACTGATACTCGGAGCTCTCCCAATCCCCACTCAAACGCTCG
Geum rivale genome assembly, chromosome: 1.
OZ123678.1:8593234-8593252
CTCTCCCCAGAGCTTCATAGCTTTTCAGCT8593234ATGGCGTCACTGATACTCGGAGCTCTCCCTATCCCCACACAATCCCTCG
Geum rivale genome assembly, chromosome: 4.
OZ123681.1:6721233-6721251
CTCTCCCCGGAGCTTCATAGATTTTCAGCT6721233ATGGCGTCACTGATACTCGGAGCTCTCCCTATCCCCACACAATCCCTCG
Prunus armeniaca genome assembly, chromosome: 6.
OZ177842.1:21909627-21909645
CTCTCAAGCGTCAAGCTTCAAGCTTCAACC21909627ATGGCGTCACTGATACTCGGAGCTCTTCCAATCCCCACTCAAACGCTCA
Prunus brigantina genome assembly, chromosome: 6.
OZ184547.1:27684687-27684705
TCCGCTTCTCTCAAGCTTCAAGCTTCAACC27684687ATGGCGTCACTGATACTCGGAGCTCTTCCAATCCCCACTCAAACGCTCG

Data Export:

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Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGGCGTCACTGATACTCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGGCGTCACTGATACTCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.901 | 0.892 | search_plus_done; http://172.18.8.135:50800/match?q=ATGGCGTCACTGATACTCG&k=0&no_gap=0&offset=0&limit=50
0.985 | 0.084 | search_minus_done; http://172.18.8.135:50800/match?q=CGAGTATCAGTGACGCCAT&k=0&no_gap=0&offset=0&limit=0
0.985 | 0.000 | cgi_end;

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