GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 06:09:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arctium minus genome assembly, chromosome: 1.
OX941080.1:53976827-53976846
TTGACGAGCTTTCCTCTAACCATATTGTTG53976827ATGTAACTGAAGTTGAGGTGAGAGAGCCTTCGATGCCATAACCAACTTTG
Arctium minus genome assembly, chromosome: 2.
OX941081.1:31201632-31201651
TTGACGAGCTTTCCTCTGACCAGATTGTTG31201632ATGTAACTGAAGTTGAGGTGAGAGAGCCTTCAATGCCATAACCAACTTTG
Arctium minus genome assembly, chromosome: 2.
OX941081.1:88461369-88461388
TTGACTAGTTTTCCACTGACCAGCTTGTTG88461369ATGTAACTGAAGTTGAGGTGAGAGAGCCGTCGATGCCATAGCCAGCTTTG
Symphodus melops genome assembly, chromosome: 3.
OX393527.1:18253371-18253390
TTCATCTTAGAGAGGACGCATTAAGTCAGT18253371CACCTCAACTTCAGTTACATTTCAAGTAAAACTATTGTCATTTAGAAATT
TSA: Cunninghamia lanceolata Unigene12635_C.lanceolata mRNA sequence.
JU984340.1:1744-1763
TAGCTTTGGACGCCAAGAACCTTCCGGCTT1744CACCTCAACTTCAGTTACATCCTCAGGGTAGCCTTCCATAAAAGTAGTAA
Bb0086G05_f p226/135/16 Lolium perenne genomic, genomic survey sequence.
MJ284651.1:386-405
ATGATGGTCGCTGTGAAATAACTACATATC386CACCTCAACTTCAGTTACATTAAGTACACGTAAGCCTAACACAATGGTTA
Linaria vulgaris genome assembly, chromosome: 2.
OX415250.1:106591128-106591147
AGAACCTCATCACATAGCTGAAACTGAATG106591128CACCTCAACTTCAGTTACATGACAAATTGTCGGCCCCTCAATATGTTCCT
Arctium minus genome assembly, chromosome: 3.
OX941082.1:11389646-11389665
CAAAGCTGGTTATGGCATCGAAGGCTCTCT11389646CACCTCAACTTCAGTTACATCAACAATCTGGTCAGTGGAAAGCTCGTCAA
Arctium minus genome assembly, chromosome: 11.
OX941090.1:58307566-58307585
CAATGCTGGTTATTGCATCGACGGCTCTCT58307566CACCTCAACTTCAGTTACATCAACAATCTGGTCAGTGGAAAGCTCGTCAA
Carcina quercana genome assembly, chromosome: 8.
OU342434.1:14230532-14230551
AATGTAATATATGTCTATGCCTATATTTTT14230532CACCTCAACTTCAGTTACATTAACATTAATTATCATCCCGCAGGAAACCC
Sepia lycidas genome assembly, chromosome: 13.
OZ010583.1:105010320-105010339
CGCTCTGCAATGTAATCGATCCTGACTTGG105010320CACCTCAACTTCAGTTACATTATCACCGACAAGACATGCTTTCCCTCTGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATGTAACTGAAGTTGAGGTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGTAACTGAAGTTGAGGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.108 | 0.100 | search_plus_done; http://172.18.8.135:50400/match?q=ATGTAACTGAAGTTGAGGTG&k=0&no_gap=0&offset=0&limit=50
0.231 | 0.122 | search_minus_done; http://172.18.8.135:50400/match?q=CACCTCAACTTCAGTTACAT&k=0&no_gap=0&offset=0&limit=47
0.236 | 0.005 | cgi_end;

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