GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 18:05:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Fissipunctia ypsillon genome assembly, chromosome: 25.
OX387669.1:10528479-10528498
GTGCTTTCCGAGGCACGGAGGAGTCTCGAT10528479ATGTAATGAATGGAATTCTGTCGCGACAATATGAATGAATTGTGTTCTCT
Ostrinia nubilalis genome assembly, chromosome: 22.
OY979756.1:3087889-3087908
AAATGAAGGTTTTATTTATTGTGAACATTA3087889ATGTAATGAATGGAATTCTGCACTTATCGGCTCGATCGGTGTTATTTTCT
Rhinatrema bivittatum genome assembly, chromosome: 2.
LR584388.1:785927515-785927534
CATGCATGGGAAATGGACCCTCAAATGAAA785927515CAGAATTCCATTCATTACATTTCACCCATTTGATTCAAATGAATGCACAT
Scyliorhinus canicula genome assembly, chromosome: 20.
LR744049.1:2976104-2976123
ACATTATGGAATGATTGTTAACTTGAACTA2976104CAGAATTCCATTCATTACATAGAACATAGAACATACAGTGCAGAAGGAGG
Podarcis cretensis genome assembly, chromosome: Z.
OX638163.1:32863936-32863955
TTTCCACATTTCTGGTCCCTTCCCCTTTTC32863936CAGAATTCCATTCATTACATTCAGTAATGGGTTAATTACCAGCTTCTGTA
Stenodema calcarata genome assembly, chromosome: 8.
OY986055.1:17857691-17857710
ATCGAAGGCCTTAGCCAGACCTAAGAGGAC17857691CAGAATTCCATTCATTACATCGGGGACCTGACTACTGCCGCACCTACCGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATGTAATGAATGGAATTCTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGTAATGAATGGAATTCTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.093 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=ATGTAATGAATGGAATTCTG&k=0&no_gap=0&offset=0&limit=50
0.124 | 0.030 | search_minus_done; http://172.18.8.135:50400/match?q=CAGAATTCCATTCATTACAT&k=0&no_gap=0&offset=0&limit=48
0.126 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).