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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:41:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Musa troglodytarum cultivar karat chromosome 5.
CP097507.1:9321763-9321782
GCGGCGTTGAAGCGGGGATGGATGGTGTGG9321763ATGTAGAAGGGCGCAATGTCGGGATCGCACGTCTCCGGCGAGTGGCTGAG
TSA: Musa acuminata AAA Group Unigene14899_B1 mRNA sequence.
JV360469.1:294-313
GTCAGCCGCTCGCCGGAGACGTGCGATCCC294GACATTGCGCCCTTCTACATACACACCATCCATCCCCGCTTCAACGCCGC
TSA: Musa acuminata AAA Group Unigene100205_NK1 mRNA sequence.
JV432519.1:302-321
GTCAGCCGCTCGCCGGAGACGTGCGATCCC302GACATTGCGCCCTTCTACATACACACCATCCATCCCCGCTTCAACGCCGC
Musa acuminata subsp. malaccensis isolate AA chromosome 5.
CP126374.1:6604793-6604812
CTCAGCCGCTCGCCGGAGACGTGCGATCCC6604793GACATTGCGCCCTTCTACATACACACCATCCATCCCCGCTTCAACGCCGC
Musa acuminata subsp. malaccensis isolate AA chromosome 16.
CP126385.1:6592335-6592354
CTCAGCCGCTCGCCGGAGACGTGCGATCCC6592335GACATTGCGCCCTTCTACATACACACCATCCATCCCCGCTTCAACGCCGC
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A05.
HG996470.1:6815439-6815458
CTCAGCCGCTCGCCGGAGACGTGCGATCCC6815439GACATTGCGCCCTTCTACATACACACCATCCATCCCCGCTTCAACGCCGC
Musa schizocarpa genome assembly, chromosome: S05.
LS990919.1:7419153-7419172
CTCAGCCGCTCGCCGGAGACGTGCGATCCC7419153GACATTGCGCCCTTCTACATACACACCATCCATCCCCGCTTCAACGCCGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGTAGAAGGGCGCAATGTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGTAGAAGGGCGCAATGTC | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.150 | 0.142 | search_plus_done; http://172.18.8.135:50400/match?q=ATGTAGAAGGGCGCAATGTC&k=0&no_gap=0&offset=0&limit=50
0.279 | 0.129 | search_minus_done; http://172.18.8.135:50400/match?q=GACATTGCGCCCTTCTACAT&k=0&no_gap=0&offset=0&limit=49
0.283 | 0.004 | cgi_end;

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