GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 05:15:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

WS02710.C21_J17 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02710_J17 5, mRNA sequence.
DR522025.1:448-467
TTCCTCGCGAAGATGGCAAACTCTCTGGAC448ATGTCCTTAGAAGACCTCATTAAGACCAACAAGCCCTTCCGTGGCCGTGG
Picea glauca clone GQ0254_O01 mRNA sequence.
BT103480.1:259-278
TTCCTCGCGAAGATGGCAAACTCTCTGGAC259ATGTCCTTAGAAGACCTCATTAAGACCAACAAGCCCTTCCGTGGCCGTGG
Plutella xylostella genome assembly, chromosome: 13.
OW026562.1:5031723-5031742
AAGAAATCACTTTAACTGTTTTAGTGGCTC5031723ATGTCCTTAGAAGACCTCATGAAATTCCAGCGAAGTAAGTACTTAGGTAC
Gonocerus acuteangulatus genome assembly, chromosome: 1.
OX328123.1:119576410-119576429
TGCCAATACAAGAGATGTTATAAGAAAGAA119576410ATGTCCTTAGAAGACCTCATAGTTACTTACTAAGAACAGTAAAGACACTT
WS0058.B21_B12 WS-PP-A-6 Picea glauca cDNA clone WS0058_B12 3', mRNA sequence.
CO233853.1:254-273
CCACGGCCACGGAAGGGCTTGTTGGTCTTA254ATGAGGTCTTCTAAGGACATGTCCAGAGAGTTTGCCATCTTCGCGAGGAA
GQ0254.B7_O01 GQ025: Annual flush SHOOTS diurnal cycle- trees Picea glauca cDNA clone GQ0254_O01 3', mRNA sequence.
CO487800.2:245-264
CCACGGCCACGGAAGGGCTTGTTGGTCTTA245ATGAGGTCTTCTAAGGACATGTCCAGAGAGTTTGCCATCTTCGCGAGGAA
Dexiosoma caninum genome assembly, chromosome: 5.
OZ004729.1:59481036-59481055
TGCTTTGCGGCTAACGTGTTTGCTTTACAG59481036ATGAGGTCTTCTAAGGACATAAACTTTAATGTGAATTCATCTTACGACCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATGTCCTTAGAAGACCTCAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGTCCTTAGAAGACCTCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.161 | 0.152 | search_plus_done; http://172.18.8.135:50400/match?q=ATGTCCTTAGAAGACCTCAT&k=0&no_gap=0&offset=0&limit=50
0.265 | 0.105 | search_minus_done; http://172.18.8.135:50400/match?q=ATGAGGTCTTCTAAGGACAT&k=0&no_gap=0&offset=0&limit=46
0.267 | 0.002 | cgi_end;

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