GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-18 23:57:29, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Myotis mystacinus genome assembly, chromosome: 1.
OZ065553.2:175594602-175594621
GCACAGAGTGCTGTGGAAGACAAACTTGAG175594602ATGTGTTGCCAAAATGCAGAGGGAAAGGACAATGGAATGATGATAGCATA
Myotis mystacinus genome assembly, chromosome: 1.
OZ077851.1:173519265-173519284
GCACAGATTGCTGTGGAAGACAAACTTGAG173519265ATGTGTTGCCAAAATGCAGAGGGAAAGGACAATGGAATGATGATAGCATA
Halichoerus grypus genome assembly, chromosome: 9.
OZ210068.1:122642881-122642900
CACATTAGGAACCTGAGGCTTAACTAAAAA122642881ATGTGTTGCCAAAATGCAGATAACACAGCCCTAACATTTGCATAATTGGA
Ranunculus sceleratus genome assembly, chromosome: 8.
OZ205670.1:164247291-164247310
TACGACCTTACGAAAACAGCATCAACAAAG164247291ATGTGTTGCCAAAATGCAGAATAATAGCACTCAAATGTGGTGCTCACATA
Lepidochitona cinerea genome assembly, chromosome: 1.
OZ020551.1:96970066-96970085
CTCTTTTTGTGTATCTAGACTTGAGTTAGC96970066ATGTGTTGCCAAAATGCAGATATTTTTCTGTTTAAACAAATTTATCGGCT
Azelia nebulosa genome assembly, chromosome: 1.
OZ174196.1:51297407-51297426
AAAAATTTATGAAAATCTGTGGTCGGAATC51297407ATGTGTTGCCAAAATGCAGATCAGACAGCATATAAACACCTAGCTATATA
Myotis daubentonii genome assembly, chromosome: 21.
OY725380.1:14559533-14559552
ATCCAGACTTTGGTGCGAAGTCGCCTGACT14559533TCTGCATTTTGGCAACACATTCAAACGTGCCTCTAGCTCAGTGGTTCTCA
Myotis nattereri genome assembly, chromosome: 21.
OZ125697.1:13308384-13308403
ATCCAGACTTTGGTGCGAAGTCGCCTGACT13308384TCTGCATTTTGGCAACACATTCAAACGTGCCTCTAGCTCAGTGGTTCTCA
Myotis emarginatus genome assembly, chromosome: 1.
OZ220647.1:56545998-56546017
TATGCTATCATCATTCCATTGTCCTTTCCC56545998TCTGCATTTTGGCAACACATCTCAAGTTTGTCTTCCACAGCACTCTGTGC
Warburgia ugandensis isolate CL-2023a chromosome 8.
CP141133.1:4487049-4487068
TTCTATCATTTCTTATATTGCTACTCAACA4487049TCTGCATTTTGGCAACACATCATATATACATGTTGTTCCTTAACAGCCTA
Santalum album isolate Sal_t2t chromosome 2.
CP159899.1:10704892-10704911
GGCCACTGTAAGAACAGGTGATCGTTCATC10704892TCTGCATTTTGGCAACACATTATAACACATTTGGAGATATAGCTTTGTGT
Stomoxys calcitrans genome assembly, chromosome: 4.
OY720438.1:7176385-7176404
TATTGTTTAAGGAAGTTTTTTAAGGAGTTG7176385TCTGCATTTTGGCAACACATTTCTACTTCACAATCGTTGATTTCAGGAGC
Azelia nebulosa genome assembly, chromosome: 2.
OZ174197.1:73727597-73727616
TATATAGCTAGGTGTTTATATGCTGTCTAA73727597TCTGCATTTTGGCAACACATGATTCCGACCACAGATTTTCATAAATTTTT
Larinioides cornutus genome assembly, chromosome: 8.
OZ204537.1:146531311-146531330
AATAATATGAAATTTTGGAAGACAAAATTT146531311TCTGCATTTTGGCAACACATGATTAACAGAGTGGAATAGGGATCAGAGAT
Echinaster sepositus genome assembly, chromosome: 1.
OZ209000.1:42176605-42176624
GTGCCAAAAAATTAGAAAATGTCAATCTTA42176605TCTGCATTTTGGCAACACATAAGACCCTGCAATTATCCACAAGGTATAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATGTGTTGCCAAAATGCAGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGTGTTGCCAAAATGCAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.149 | 0.140 | search_plus_done; http://172.18.8.135:50800/match?q=ATGTGTTGCCAAAATGCAGA&k=0&no_gap=0&offset=0&limit=50
0.220 | 0.071 | search_minus_done; http://172.18.8.135:50800/match?q=TCTGCATTTTGGCAACACAT&k=0&no_gap=0&offset=0&limit=44
0.226 | 0.006 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).