GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 04:32:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 34 from patent US 11492637.
OO846685.1:225027-225046
TGAGGAGAAGAGAGGTACATAAATTGGAAG225027ATGTGTTGGCAGCAATAGCAAGCAAGTAGAGAGAGAGAAAGAGTGCAGTG
GM89023A2A06.r1 Gm-r1089 Glycine max cDNA clone Gm-r1089-8460 3, mRNA sequence.
CO985071.1:816-835
AGAGGAGAAGAGAGGTACATAAATTGGAAG816ATGTGTTGGCAGCAATAGCAAGCAA
Glycine max DNA, BAC clone: GMJENb0022P04_R, 3'end, cultivar: ENREI.
LB146274.1:286-305
AGAGGAGAAGAGAGGTACATAAATTGGAAG286ATGTGTTGGCAGCAATAGCAAGCAAGTAGAGAGAGAGAGAGAGAGAGAGA
Palloptera scutellata genome assembly, chromosome: 2.
OY282450.1:72095389-72095408
GTGTGAATCTTTGCAAATGAAGAAAGTTTA72095389ATGTGTTGGCAGCAATAGCAACGGCAGCAGCAGCAGCAGCAGCAGCAGCA
Sequence 38 from patent US 11492637.
OO846689.1:354933-354952
CACTGCACTCTTTCTCTCTCTCTACTTGCT354933TGCTATTGCTGCCAACACATCTTCCAATTTATGTACCTCTCTTTTCCTCA
san07g04.y1 Gm-c1084 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1084-3368 5', mRNA sequence.
BM954551.1:179-198
TCTCTCTCTCTCTCTCTCTCTCTACTTGCT179TGCTATTGCTGCCAACACATCTTCCAATTTATGTACCTCTCTTCTCCTCT
Glycine max cultivar Williams 82 chromosome 5.
CP126430.1:38811627-38811646
TCTCTCTCTCTCTCTCTCTCTCTACTTGCT38811627TGCTATTGCTGCCAACACATCTTCCAATTTATGTACCTCTCTTCTCCTCT
Glycine max cultivar Williams 82 chromosome 8.
CP126433.1:10404251-10404270
ACCCTCTCTCTCTCTCTCTCTCTACTTGCT10404251TGCTATTGCTGCCAACACATCTTCCAATTATGTACCTCTCTTCTCCTCTT
Thelaira solivaga genome assembly, chromosome: 4.
OX377613.1:58105409-58105428
ACTTTTTCATTTGATGATAAATCTGTGACC58105409TGCTATTGCTGCCAACACATTCCTCAACTAGGCTCTCTGAAGCTTTAGTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGTGTTGGCAGCAATAGCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGTGTTGGCAGCAATAGCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.776 | 0.767 | search_plus_done; http://172.18.8.135:50400/match?q=ATGTGTTGGCAGCAATAGCA&k=0&no_gap=0&offset=0&limit=50
1.992 | 1.216 | search_minus_done; http://172.18.8.135:50400/match?q=TGCTATTGCTGCCAACACAT&k=0&no_gap=0&offset=0&limit=46
1.995 | 0.004 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).