GGGenome | Results

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2025-04-12 11:10:24, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Lotus japonicus genomic DNA, chromosome 5, clone: LjT34P02, TM0146.
AP004969.1:14048-14067

CGATGGAGTTGGTGGTGGTGGTGGAGGTAG14048ATGTTACCTGATGGCGACGGTGGTCGTGGTAGTAGTAGTGAGCTGGTGGA

Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:3609108-3609127

CGATGGAGTTGGTGGTGGTGGTGGAGGTAG3609108ATGTTACCTGATGGCGACGGTGGTCGTGGTAGTAGTAGTGACCTGGTGGA

Niallia circulans strain FDAARGOS_783 chromosome, complete genome.
CP053989.1:1766286-1766305

GACAAACCGGATATTGCGATTCTTGATGTT1766286ATGTTACCTGATGGCGACGGATTTTCCCTTCTGTCTTCTATCAGACAGCT

Lysinibacillus parviboronicapiens strain VT1065 chromosome, complete genome.
CP073713.1:4617157-4617176

GATAAGCCGGATATAGCAATTCTTGATGTC4617157ATGTTACCTGATGGCGACGGATTTTCACTTTTGTCATCCATCAGACAATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.133 | 0.124 | search_plus_done; http://172.18.8.135:50400/match?q=ATGTTACCTGATGGCGACGG&k=0&no_gap=0&offset=0&limit=50
0.224 | 0.092 | search_minus_done; http://172.18.8.135:50400/match?q=CCGTCGCCATCAGGTAACAT&k=0&no_gap=0&offset=0&limit=46
0.224 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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