GGGenome | Results

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2025-04-10 00:06:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Acomys russatus genome assembly, chromosome: 28.
LR877239.1:2287073-2287092

GACGTAGTCTTGAGCAAGATGGGGATTTTT2287073CCTCCCATCTAAGGCAACATAGGTTGAAGATATCTGCAAATTCTGTACTT

KS19010B02 KS19 Capsicum annuum cDNA, mRNA sequence.
GD088264.1:112-131

AGTCTTTGCCATTTCACTATTCTTTACAAC112CCTCCCATCTAAGGCAACATTCTTTTTCCCAAGATTCCAAGCACCTCCCC

KS20018A09 KS20 Capsicum annuum cDNA, mRNA sequence.
GD094937.1:77-96

AGTCTTTGCCATTTCACTATTCTTTACAAC77CCTCCCATCTAAGGCAACATTCTTTTTCCCAAGATTCCAAGCACCTCCCC

KS20028H03 KS20 Capsicum annuum cDNA, mRNA sequence.
GD095943.1:99-118

AGTCTTTGCCATTTCACTATTCTTTACAAC99CCTCCCATCTAAGGCAACATTCTTTTTCCCAAGATTCCAAGCACCTCCCC

KS20038D02 KS20 Capsicum annuum cDNA, mRNA sequence.
GD096823.1:99-118

AGTCTTTGCCATTTCACTATTCTTTACAAC99CCTCCCATCTAAGGCAACATTCTTTTTCCCAAGATTCCAAGCACCTCCCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.106 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=ATGTTGCCTTAGATGGGAGG&k=0&no_gap=0&offset=0&limit=50
0.448 | 0.342 | search_minus_done; http://172.18.8.135:50400/match?q=CCTCCCATCTAAGGCAACAT&k=0&no_gap=0&offset=0&limit=50
0.452 | 0.004 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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