GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-20 11:31:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pipistrellus pygmaeus genome assembly, chromosome: 2.
OX465303.1:198634142-198634161
CCCCCACGGTGCGGCTCAGGCGGGTGTGAC198634142ATTAACAAGCCGTTTGTGGCTGAAGGAGGCCTTGGCCTCGGGAGCGAGCA
Arachis hypogaea DNA, clone: AHGS42O24.
DH961687.1:352-371
TTTAGCCATAACTTGAGCTACGGAGCTCCG352ATTAACAAGCCGTTTGTGGCCACGCGAAGCTCTTGCTGAGCCCATCATTT
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:30094626-30094645
GGGGGCCATAACTTGAGCTTCGGAGCTCCG30094626ATTAACAAGCCGTTTGTGGCCACGCGAAGCTCTTATCGAACTCTTTGTTT
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:29719812-29719831
GGGGGCCATAACTTGAGCTTCGGAGCTCCG29719812ATTAACAAGCCGTTTGTGGCCACGCGAAGCTCTTATCGAACTCTTTGTTT
Arachis hypogaea cultivar Shitouqi chromosome B06.
CP030998.1:36874478-36874497
AAATGATGGGCTCAGCAAGAGCTTCGCGTG36874478GCCACAAACGGCTTGTTAATCGGAGCTCCGTAGCTCAAGTTATGGCTAAA
Arachis ipaensis cultivar K30076 chromosome 06.
CP049897.1:33492451-33492470
AAATGATGGGCTCAGCAAGAGCTTCGCGTG33492451GCCACAAACGGCTTGTTAATCGGAGCTCCGTAGCTCAAGTTATGGCTAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATTAACAAGCCGTTTGTGGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTAACAAGCCGTTTGTGGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.141 | 0.131 | search_plus_done; http://172.18.8.135:50400/match?q=ATTAACAAGCCGTTTGTGGC&k=0&no_gap=0&offset=0&limit=50
0.170 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=GCCACAAACGGCTTGTTAAT&k=0&no_gap=0&offset=0&limit=46
0.171 | 0.001 | cgi_end;

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