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2025-04-08 15:39:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Sequence 2 from patent US 6593084.
AR353563.1:1-26

1ATTAACCCTCACTAAATCGGTCATAG

Sequence 28 from Patent WO0240666.
AX431395.1:1-26

1ATTAACCCTCACTAAATCGGTCATAG

JP 2004512852-A/19: Fat Regulated Genes, Uses Thereof, and Compounds for Modulating Same.
DD010081.1:1-26

1ATTAACCCTCACTAAATCGGTCATAG

JP 2003235570-A/2: Polypeptide having interaction with hibernation-specific protein and its utilization.
DJ389550.1:1-26

1ATTAACCCTCACTAAATCGGTCATAG

Sequence 10 from patent US 8349562.
GZ703047.1:1-26

1ATTAACCCTCACTAAATCGGTCATAG

Sequence 10 from patent US 9109258.
HL076159.1:1-26

1ATTAACCCTCACTAAATCGGTCATAG

EST00002 Tripsacum dactyloides caryopsis Differential Display Tripsacum dactyloides cDNA clone ApoU2-2 5', mRNA sequence.
CB252004.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGATATAGGCAAGTACAGCCAGTCTGATAGTT

EST00004 Tripsacum dactyloides caryopsis Differential Display Tripsacum dactyloides cDNA clone ApoD2-1 5', mRNA sequence.
CB252006.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGAGAGTGAGAGAGTGAGAGAGAGAGAGAGAG

EST00005 Tripsacum dactyloides caryopsis Differential Display Tripsacum dactyloides cDNA clone ApoD5-5 5', mRNA sequence.
CB252007.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGC

5 Differentially expressed Dermacentor variabilis cDNA fragments Dermacentor variabilis cDNA clone Ou211, mRNA sequence.
CB275455.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGTGAATGAGACAGAGAGAAAGAAATAAGTGC

6 Differentially expressed Dermacentor variabilis cDNA fragments Dermacentor variabilis cDNA clone Oi212, mRNA sequence.
CB275456.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGAAACAGCAGAGCTTCAACCAGGAGAAATTG

EST0108 Brassica juncea leaf disc explants Brassica juncea cDNA, mRNA sequence.
CK991368.1:12-37

CACTAGTGATT12ATTAACCCTCACTAAATCGGTCATAGCAGCAGTTGAGCTCATAGCAGAAGAGTCCG

EST0953 Brassica juncea leaf disc explants Brassica juncea cDNA, mRNA sequence.
CK991439.1:19-44

GCGAATTCACTAGTGATT19ATTAACCCTCACTAAATCGGTCATAGACTATATAGTTCATAGTTAATCATGTTCAT

EST0954 Brassica juncea leaf disc explants Brassica juncea cDNA, mRNA sequence.
CK991440.1:19-44

GCGAATTCACTAGTGATT19ATTAACCCTCACTAAATCGGTCATAGAAAGAACCCCCATCGGGGAGTGAAATAGAA

54-37 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605642.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGATCTAAAACTAAAATCTAGAGAAAATACAG

54-47 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605652.1:2-27

T2ATTAACCCTCACTAAATCGGTCATAGAAAAGAATGAAACAATGCAATTTACAACAA

DD11-39 Tobacco ESTs characterized by a hypersensitive response specific pattern of expression library Nicotiana tabacum cDNA clone DD11-39 similar to C3HC4-type RING domain containing protein (RDCP1)
CV507095.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGAGTGGAATCAAGGTTTTTTGTGAAACTTCA

DD-L26-1a Sugar Beet differential display cDNA Beta vulgaris cDNA similar to Folate-binding protein, mRNA sequence.
CX779671.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGTTTGTTTGATGGTACCTGCTACTCGGATAA

DD-L18-3 Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779675.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGACTAAATGAAAACAACTCAATAAGTAAACA

DD-L21-2 Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779678.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGCACAGGTGTACATTAAACTTCAACTACATA

DD-L21-3 Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779679.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGCCCCGATTCCCATTTCGGGATTTCCTCTGC

DD-L22-4 Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779681.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGTGCGAAAAGAAGGATCTCGATCGGAACTGT

DD-L30-2 Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779682.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGTTTTTCAGGATATACACAGAAAATATGGTC

DD-P28-1.3 Sugar Beet differential display cDNA Beta vulgaris cDNA similar to Probable folate binding protein, mRNA sequence.
CX779697.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGTTTGTTTGATGGTACCTGCTACTCGGATAA

DD-P26-6.2 Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779699.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGCCCTTCCTTCCTAACATTATAATTATCGGC

cembA02 Differential display of COTTON GENOTYPE, leaf Gossypium arboreum cDNA clone P2T1-4 3', mRNA sequence.
EE298191.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGCAGAGATATTTGCTTGCACTGTTGGGCAAA

Carica papaya ripening induced down-regulated cDNA clone DD-9 Induced ripening papaya pulp Carica papaya cDNA clone DD-9 similar to Ribonuclease III family protein, mRNA sequence.
FK759822.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGCTAAAACCGAGGATGCTCATAACTTATATT

Carica papaya ripening induced up-regulated cDNA clone DD-11 Induced ripening papaya pulp Carica papaya cDNA clone DD-11, mRNA sequence.
FK759824.1:2-27

T2ATTAACCCTCACTAAATCGGTCATAGGAAGTGAGAATGTTCCCTGTCTCCAGCCAA

Carica papaya ripening induced down-regulated cDNA clone DD-12 Induced ripening papaya pulp Carica papaya cDNA clone DD-12, mRNA sequence.
FK759825.1:2-27

T2ATTAACCCTCACTAAATCGGTCATAGATATCCGACCAAGAGACTTGTTCTTTAAGA

Carica papaya ripening induced up-regulated cDNA clone DD-13 Induced ripening papaya pulp Carica papaya cDNA clone DD-13 similar to Large subunit ribosomal gene, mRNA sequence.
FK759826.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGTGATCCGGGAGTCCCGTGTGGAAGGGCTCT

Carica papaya ripening induced up-regulated cDNA clone DD-14 Induced ripening papaya pulp Carica papaya cDNA clone DD-14, mRNA sequence.
FK759827.1:2-27

T2ATTAACCCTCACTAAATCGGTCATAGAGACGTGCATTTTCTTGCCCAGTTGGGGAA

Carica papaya ripening induced down-regulated cDNA clone DD-16 Induced ripening papaya pulp Carica papaya cDNA clone DD-16 similar to Syntaxin family protein, mRNA sequence.
FK759829.1:2-27

T2ATTAACCCTCACTAAATCGGTCATAGAAGAAATGGTGCAGACCTTAATGCTAATTC

DDB13 Oreochromis niloticus adult liver Oreochromis niloticus cDNA clone DDB13, mRNA sequence.
GH335074.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGCAGCTCGCATCAACACACACCAAAAGCACT

PRABD_01 Differentially expressed genes during needle maturation Pinus radiata cDNA, mRNA sequence.
GO270982.1:10-35

CTAGNGATT10ATTAACCCTCACTAAATCGGTCATAGGTATAAGACCAATTGGCGCATTGACCATAA

PRABD_05 Differentially expressed genes during needle maturation Pinus radiata cDNA, mRNA sequence.
GO270986.1:11-36

ACTAGTGATT11ATTAACCCTCACTAAATCGGTCATAGTCCAGGAATAGGGCACGATGAACCCCCTGG

JZS119f chicken breast blister (keel cyst) related genes Gallus gallus cDNA clone JZS119 5', mRNA sequence.
GW317171.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGGGGTCTGTTTGCTTGCCTGGTGAGCATCCC

JZS119g chicken breast blister (keel cyst) related genes Gallus gallus cDNA clone JZS119 5', mRNA sequence.
GW317172.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGGGGTCTGTTTGCTTGCCTGGTGAGCATCCC

JZS119h chicken breast blister (keel cyst) related genes Gallus gallus cDNA clone JZS119 5', mRNA sequence.
GW836603.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGGGGTCTGTTTGCTTGCCTGGTGAGCATCCC

Dendrobium grex Madame Thong-IN putative transcriptional repressor (ovg27) mRNA, partial cds.
AF100331.1:1-26

1ATTAACCCTCACTAAATCGGTCATAGCCACATGTTGGCAAGCAATGTTCGACGAGC

JP 2003235570-A/26: Polypeptide having interaction with hibernation-specific protein and its utilization.
DJ389574.1:623-648

CCAGGACCTTGCACATGCTAAGCAAGTACT623CTATGACCGATTTAGTGAGGGTTAATAGTCATTATGCTGAGTGATATCTTTTTTTT

EST00005 Tripsacum dactyloides caryopsis Differential Display Tripsacum dactyloides cDNA clone ApoD5-5 5', mRNA sequence.
CB252007.1:170-195

CCCACGTTAGGGCGTTCGCGCCCCAAGGGC170CTATGACCGATTTAGTGAGGGTTAAT

EST0102 Brassica juncea leaf disc explants Brassica juncea cDNA, mRNA sequence.
CK991365.1:522-547

CGGACTCTTCTGCTATGAGCTCAACTGCTG522CTATGACCGATTTAGTGAGGGTTAATAATCGAATTCCCGCGG

EST0103 Brassica juncea leaf disc explants Brassica juncea cDNA, mRNA sequence.
CK991366.1:517-542

ATGAAGGGGCGGCCGTTCAAACGGTCGTGG517CTATGACCGATTTAGTGAGGGTTAATAATCGAATTCCCGCGGCCGC

EST0107 Brassica juncea leaf disc explants Brassica juncea cDNA, mRNA sequence.
CK991367.1:518-543

GAACCCACTATAACTCAAGGTCCAAGCTTA518CTATGACCGATTTAGTGAGGGTTAATAATCGAATTCCCGCGGCCG

54-3 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605608.1:258-283

CAACAAACATTGACCACTATGAAATTTCAT258CTATGACCGATTTAGTGAGGGTTAAT

54-17 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605622.1:258-283

CAACAAACATTGACCACTATGAAATTTCAT258CTATGACCGATTTAGTGAGGGTTAAT

54-29 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605634.1:147-172

AAAAAATAAAAAGCTCTGCTTACGTACACC147CTATGACCGATTTAGTGAGGGTTAATAA

54-48 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605653.1:136-161

TGTTTCTAGTTCACTTCCTCCCCTTCAATT136CTATGACCGATTTAGTGAGGGTTAAT

DD-L23-2a Sugar Beet differential display cDNA Beta vulgaris cDNA similar to putative retroelement pol polyprotein, mRNA sequence.
CX779668.1:303-328

GCCTCCTCTACGTTGTCCTTTTTTGAATCC303CTATGACCGATTTAGTGAGGGTTAAT

DD-L25-1a Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779670.1:283-308

GTATGCCGTGGACCTGGGCCAACGCTTTGG283CTATGACCGATTTAGTGAGGGTTAATAA

DD-L29-2a Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779673.1:407-432

TAAAATGGACTCTGAGATCTGAACCCCTTG407CTATGACCGATTTAGTGAGGGTTAAT

Data Export:

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Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATTAACCCTCACTAAATCGGTCATAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTAACCCTCACTAAATCGGTCATAG | format : html | download : | debug :

0.009 | 0.009 | search_start;
1.966 | 1.957 | search_plus_done; http://172.18.8.135:50400/match?q=ATTAACCCTCACTAAATCGGTCATAG&k=0&no_gap=0&offset=0&limit=50
2.333 | 0.367 | search_minus_done; http://172.18.8.135:50400/match?q=CTATGACCGATTTAGTGAGGGTTAAT&k=0&no_gap=0&offset=0&limit=11
2.341 | 0.008 | cgi_end;

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