GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 03:34:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:95473873-95473892
TTCTCTTGAGACGTGGCCTCATATGCATGG95473873ATTACCACCATCTCTCTGGCATTTCATGAATGCTGAGGCCTTACAGCTAC
Phaonia tiefii genome assembly, chromosome: 4.
OZ008370.1:135887428-135887447
CAATGCACCGCATTACACCCCTTTCTCAGT135887428ATTACCACCATCTCTCTGGCAATAAAATACCCAGTTTGAAAAACTAATGG
Lotus japonicus genomic DNA, chromosome 1, clone: LjT12M01, TM0772.
AP007581.2:100657-100676
GTAGCTGTAAGGCCTCAGCATTCATGAAAT100657GCCAGAGAGATGGTGGTAATCCATGCATATGAGGCCACGTCTCAAGAGAA
Lotus japonicus genomic DNA, chromosome 1, clone: LjT15K21, TM0088.
AP010600.1:7900-7919
GTAGCTGTAAGGCCTCAGCATTCATGAAAT7900GCCAGAGAGATGGTGGTAATCCATGCATATGAGGCCACGTCTCAAGAGAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATTACCACCATCTCTCTGGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTACCACCATCTCTCTGGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.106 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=ATTACCACCATCTCTCTGGC&k=0&no_gap=0&offset=0&limit=50
0.132 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=GCCAGAGAGATGGTGGTAAT&k=0&no_gap=0&offset=0&limit=48
0.134 | 0.002 | cgi_end;

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