GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2026-02-20 23:41:30, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Heterocephalus glaber genome assembly, chromosome: 13.
OX090953.1:57792470-57792489
AACTCACCATTGTCTTTCCAGACTTTATTT57792470ATTCCCATTATTGGCTGCTGTACTTTTTCTCCTTTGCTGACTTATCTTGA
Reichenbachiella agarivorans strain BKB1-1 chromosome, complete genome.
CP106679.1:40306-40325
GCCCAATCCCTGCAAATCACTGTAATACGC40306ATTCCCATTATTGGCTGCTGTAAAGTCTTTGACAAACTGCTTGAGGTATG
Lissotriton helveticus genome assembly, chromosome: 10.
OZ180056.1:528519469-528519488
CAACTCATTTTCACCAAAATTAATAGTGAT528519469ATTCCCATTATTGGCTGCTGTACTTTACATACAATGCTTCTACCAATATT
Heterocephalus glaber genome assembly, chromosome: 13.
OX090921.1:40345403-40345422
TCAAGATAAGTCAGCAAAGGAGAAAAAGTA40345403CAGCAGCCAATAATGGGAATAAATAAAGTCTGGAAAGACAATGGTGAGTT
Heterocephalus glaber genome assembly, chromosome: 13.
OZ001078.1:24983403-24983422
TCAAGATAAGTCAGCAAAGGAGAAAAAGTA24983403CAGCAGCCAATAATGGGAATAAATAAAGTCTGGAAAGACAATGGTGAGTT
Heterocephalus glaber genome assembly, chromosome: 13.
OZ001121.1:23885641-23885660
TCAAGATAAGTCAGCAAAGGAGAAAAAGTA23885641CAGCAGCCAATAATGGGAATAAATAAAGTCTGGAAAGACAATGGTGAGTT
Heterocephalus glaber genome assembly, chromosome: 10.
OZ179178.1:24118403-24118422
TCAAGATAAGTCAGCAAAGGAGAAAAAGTA24118403CAGCAGCCAATAATGGGAATAAATAAAGTCTGGAAAGACAATGGTGAGTT
Heterocephalus glaber genome assembly, chromosome: 10.
OZ179209.1:23885641-23885660
TCAAGATAAGTCAGCAAAGGAGAAAAAGTA23885641CAGCAGCCAATAATGGGAATAAATAAAGTCTGGAAAGACAATGGTGAGTT
Stewartia floridana genome assembly, chromosome: 16.
OZ077515.1:56779447-56779466
GTCCGAAAACTTTGACTACAGTAATTAAAG56779447CAGCAGCCAATAATGGGAATTGGTATGTAACACCTGCATCAGTATTTCAG
Venus verrucosa genome assembly, chromosome: 16.
OZ121658.1:48964327-48964346
TCATTTTTCCGCTGAAGAGAAAGGCATAAG48964327CAGCAGCCAATAATGGGAATATTTTCTCTTGTTGTGTCTGATAGTCTATC
Merluccius merluccius genome assembly, chromosome: 11.
OZ177855.1:14049201-14049220
ATTCAAGTTTCAAGTTTGTCATATGCACAG14049201CAGCAGCCAATAATGGGAATGAAATTCTTATCTTTCCCGCTTCCACAACA
Merluccius merluccius genome assembly, chromosome: 11.
OZ211277.1:14304854-14304873
ATTCAAGTTTCAAGTTTGTCATATGCACAG14304854CAGCAGCCAATAATGGGAATGAAATTCTTATCTTTCCCGCTTCCACAACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATTCCCATTATTGGCTGCTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTCCCATTATTGGCTGCTG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.116 | 0.107 | search_plus_done; http://172.18.8.135:50800/match?q=ATTCCCATTATTGGCTGCTG&k=0&no_gap=0&offset=0&limit=50
0.151 | 0.034 | search_minus_done; http://172.18.8.135:50800/match?q=CAGCAGCCAATAATGGGAAT&k=0&no_gap=0&offset=0&limit=47
0.157 | 0.006 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).