GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-07 14:59:21, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:2866667-2866686
CCAATTTTTTAGAACAGGTAGTGCTACAAA2866667ATTCGTACACGGCAACATCAATAAATGAGTTAATACTCAATAATTTGATT
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:4743099-4743118
TCAGTTTTTTAGAACAGGTAGTGCTACAAA4743099ATTCGTACACGGCAACATCAATAAACGAGTTAATATTCAAGGTGGATACT
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:4692895-4692914
TCAGTTTTTTAGAACAGGTAGTGCTACAAA4692895ATTCGTACACGGCAACATCAATAAACGAGTTAATATTCAAGGTGGATACT
Arachis hypogaea cultivar Yunnan Rainbow Peanut chromosome 03.
CP156090.1:2938582-2938601
CCAATTTTTTAGAACAGGTAGTGCTACAAA2938582ATTCGTACACGGCAACATCAATAAATGAGTTAATACTCAATAATTTGATT
Arachis hypogaea cultivar Yunnan Rainbow Peanut chromosome 13.
CP156100.1:4691616-4691635
TCAGTTTTTTAGAACAGGTAGTGCTACAAA4691616ATTCGTACACGGCAACATCAATAAACGAGTTAATATTCAAGGTGGATACT
Arachis hypogaea cultivar Huayu23 chromosome 03.
CP156110.1:2992327-2992346
CCAATTTTTTAGAACAGGTAGTGCTACAAA2992327ATTCGTACACGGCAACATCAATAAATGAGTTAATACTCAATAATTTGATT
Arachis hypogaea cultivar Huayu23 chromosome 13.
CP156120.1:4702651-4702670
TCAGTTTTTTAGAACAGGTAGTGCTACAAA4702651ATTCGTACACGGCAACATCAATAAACGAGTTAATATTCAAGGTGGATACT
Arachis hypogaea cultivar Chedouzi chromosome 03.
CP156130.1:2974640-2974659
CCAATTTTTTAGAACAGGTAGTGCTACAAA2974640ATTCGTACACGGCAACATCAATAAATGAGTTAATACTCAATAATTTGATT
Arachis hypogaea cultivar Chedouzi chromosome 13.
CP156140.1:4735040-4735059
TCAGTTTTTTAGAACAGGTAGTGCTACAAA4735040ATTCGTACACGGCAACATCAATAAACGAGTTAATATTCAAGGTGGATACT
Arachis hypogaea cultivar Laiyang Silihong chromosome 03.
CP156150.1:2970314-2970333
CCAATTTTTTAGAACAGGTAGTGCTACAAA2970314ATTCGTACACGGCAACATCAATAAATGAGTTAATACTCAATAATTTGATT
Arachis hypogaea cultivar Laiyang Silihong chromosome 13.
CP156160.1:4740310-4740329
TCAGTTTTTTAGAACAGGTAGTGCTACAAA4740310ATTCGTACACGGCAACATCAATAAACGAGTTAATATTCAAGGTGGATACT
Arachis ipaensis isolate Y4 chromosome 3.
CP160332.1:4687787-4687806
TCAGTTTTTTAGAACAGGTAGTGCTACAAA4687787ATTCGTACACGGCAACATCAATAAACGAGTTAATATTCAAGGTGGATACT
Arachis duranensis isolate Y26 chromosome 03.
CP160342.1:2622935-2622954
CAATTTTTTAGAACAGGTAGTGCTACAAAA2622935ATTCGTACACGGCAACATCAATAAATGAGTTAATACTCAATAATTTGATT
Bathycoccus prasinos strain A8 genome assembly, segment: 0_RAGOO.
OZ075456.3:5543094-5543113
CGCCTTCCAGCGATTCGCCTGCTGACATCG5543094ATTCGTACACGGCAACATCAACGCGTTTGAGCATCGAGGTCAGAACCTTG
Pseudosulfitobacter pseudonitzschiae strain SMR1 chromosome, complete genome.
CP022415.1:455488-455507
CGCCTTCCAGCGATTCGCCTGCTGACATCG455488ATTCGTACACGGCAACATCAACGCGTTTGAGCATCGAGGTCAGAACCTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATTCGTACACGGCAACATCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTCGTACACGGCAACATCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.338 | 0.329 | search_plus_done; http://172.18.8.135:50900/match?q=ATTCGTACACGGCAACATCA&k=0&no_gap=0&offset=0&limit=50
0.470 | 0.132 | search_minus_done; http://172.18.8.135:50900/match?q=TGATGTTGCCGTGTACGAAT&k=0&no_gap=0&offset=0&limit=35
0.470 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).