GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 09:12:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:516948236-516948255
CTTATATCTTTTCTTCTTGTTATTTGTGGT516948236ATTCTGCTTGTACTTGTTGTCTTGGAGGGGGAACATGATGGGTAAGTTGG
Boloria selene genome assembly, chromosome: 1.
HG993132.1:1298495-1298514
GAAGTTTGGGAAAATGATTTATTAGATGTC1298495ATTCTGCTTGTACTTGTTGTTTTTCGATAAAATTTTTCAATATGTAACAG
Euphorbia lathyris genome assembly, chromosome: 1.
OY755220.1:99440415-99440434
TCAACCCTACATATAAAAGGACAAACCCTC99440415ACAACAAGTACAAGCAGAATTGAATAAAATTATTTGCTTTTTCAAGCCAA
Acleris sparsana genome assembly, chromosome: 5.
OV281290.1:5429488-5429507
TAACGAACTTCTACATGGTGAATAAAACCT5429488ACAACAAGTACAAGCAGAATTATAAAATTCCAATAATTATTTTACGACGT
Elysia crispata genome assembly, chromosome: 9.
OY973774.1:10641440-10641459
ACTACAACTACAAGAAGTACAACTACAATT10641440ACAACAAGTACAAGCAGAATTATTACAAGTGCAAGTACAACTACAGCTAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATTCTGCTTGTACTTGTTGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTCTGCTTGTACTTGTTGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=ATTCTGCTTGTACTTGTTGT&k=0&no_gap=0&offset=0&limit=50
0.125 | 0.030 | search_minus_done; http://172.18.8.135:50400/match?q=ACAACAAGTACAAGCAGAAT&k=0&no_gap=0&offset=0&limit=48
0.127 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).