GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:21:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Elaeis guineensis EST, clone (6lib)_isotig15906.
LM624743.1:623-646
GAACCGGCGGGAGTCGACGCCGCGGGCGCG623ATTCTTGTCGAAGTCGACGCCGTTGGCACGGAGGAGCTCGATGGATTCCGGCGA
TSA: Elaeis guineensis isotig00716.Elguifruit mRNA sequence.
JO087964.1:522-545
GAACCGGCGGGAGTCGACGCCGCGGGCGCG522ATTCTTGTCGAAGTCGACGCCGTTGGCACGGAGGAGCTCGATGGATTCCGGCGA
TSA: Elaeis guineensis isotig00717.Elguifruit mRNA sequence.
JO087965.1:522-545
GAACCGGCGGGAGTCGACGCCGCGGGCGCG522ATTCTTGTCGAAGTCGACGCCGTTGGCACGGAGGAGCTCGATGGATTCCGGCGA
TSA: Elaeis guineensis isotig00720.Elguifruit mRNA sequence.
JO087968.1:522-545
GAACCGGCGGGAGTCGACGCCGCGGGCGCG522ATTCTTGTCGAAGTCGACGCCGTTGGCACGGAGGAGCTCGATGGATTCCGGCGA
OPVM00045 Elaeis guineensis shoot apex Elaeis guineensis cDNA clone 82-D09-T3.seq, mRNA sequence.
EL686441.1:422-445
TCGCCGGAATCCATCGAGCTCCTCCGTGCC422AACGGCGTCGACTTCGACAAGAATCGCGCCCGCGGCGTCGACTCCCGCCGGTTC
OPVM01534 Elaeis guineensis shoot apex Elaeis guineensis cDNA clone OPN0XX_C44-3.seq, mRNA sequence.
EL687906.1:178-201
TCGCCGGAATCCATCGAGCTCCTCCGTGCC178AACGGCGTCGACTTCGACAAGAATCGCGCCCGCGGCGTCGACTCCCGCCGGTTC
EoEST1135 Oil palm mesocarp-tissue cDNA Entry Library Elaeis oleifera cDNA clone Mo17-1149 5' similar to ribonuclease/ transcriptional repressor, mRNA sequence.
EL930304.1:421-444
TCGCCGGAATCCATCGAGCTCCTCCGTGCC421AACGGCGTCGACTTCGACAAGAATCGCGCCCGCGGCGTCGACTCCCGCCGGTTC
Elaeis guineensis clone estEgSNP55 CCR4-associated factor 1-related protein (CCR4-CAF1) mRNA, complete cds.
JX438719.1:438-461
TCGCCGGAATCCATCGAGCTCCTCCGTGCC438AACGGCGTCGACTTCGACAAGAATCGCGCCCGCGGCGTCGACTCCCGCCGGTTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATTCTTGTCGAAGTCGACGCCGTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTCTTGTCGAAGTCGACGCCGTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.235 | 0.226 | search_plus_done; http://172.18.8.135:50400/match?q=ATTCTTGTCGAAGTCGACGCCGTT&k=0&no_gap=0&offset=0&limit=50
0.422 | 0.187 | search_minus_done; http://172.18.8.135:50400/match?q=AACGGCGTCGACTTCGACAAGAAT&k=0&no_gap=0&offset=0&limit=46
0.424 | 0.003 | cgi_end;

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