GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-15 15:57:42, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Prunus dulcis DNA, pseudomolecule Pd05.
AP019301.1:11579512-11579532
AACTTCCTTCTTCTTTCTCACTGCCTATAA11579512ATTGAAGTCTTTTGCCTCAACACATTTCAAACCCACCACCCTATCTTAATT
Prunus speciosa IZO01 DNA, chromosome 5, sequence.
AP029593.1:20101553-20101573
CAACCTCCTTCTTCTTCTCACTGCCTATAA20101553ATTGAAGTCTTTTGCCTCAACACATTTCAAACCCAACACCTTATCTTAATT
Prunus speciosa IZO01 DNA, chromosome 5.
AP038359.1:19253656-19253676
CAACCTCCTTCTTCTTCTCACTGCCTATAA19253656ATTGAAGTCTTTTGCCTCAACACATTTCAAACCCAACACCTTATCTTAATT
Prunus speciosa IZO01 DNA, chromosome 5.
AP038367.1:20006032-20006052
CAACCTCCTTCTTCTTCTCACTGCCTATAA20006032ATTGAAGTCTTTTGCCTCAACACATTTCAAACCCAACACCTTATCTTAATT
Prunus dulcis genome assembly, chromosome: 5.
OZ022201.1:15381975-15381995
AACTTCCTTCTTCTTTCTCACTGCCTATAA15381975ATTGAAGTCTTTTGCCTCAACACATTTCAAACCCACCACCCTATCTTAATT
Prunus dulcis genome assembly, chromosome: 5.
OZ022210.1:15710466-15710486
AACTTCCTTCTTCTTTCTCACTGCCTATAA15710466ATTGAAGTCTTTTGCCTCAACACATTTCAAACCCACCACCCTATCTTAATT
P.persica ppEG1 gene.
X96856.1:1771-1791
AACTTCCTTCTTCTTTCTCACTGCCTATAA1771ATTGAAGTCTTTTGCCTCAACACATTTCAAACCCACCACCCTATCTTAATT
Carpetania matritensis genome assembly, chromosome: 7.
OZ032171.1:14106858-14106878
ATGTCAGGTTTTTATAGCGCTATGATTTTA14106858ATTGAAGTCTTTTGCCTCAACAGTAACAGCTTATATGTTATGGATCGAACG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATTGAAGTCTTTTGCCTCAAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTGAAGTCTTTTGCCTCAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.435 | 0.426 | search_plus_done; http://172.18.8.135:50800/match?q=ATTGAAGTCTTTTGCCTCAAC&k=0&no_gap=0&offset=0&limit=50
0.626 | 0.192 | search_minus_done; http://172.18.8.135:50800/match?q=GTTGAGGCAAAAGACTTCAAT&k=0&no_gap=0&offset=0&limit=42
0.626 | 0.000 | cgi_end;

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