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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:19:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Daucus carota subsp. sativus cultivar DH1 chromosome 7.
CP093349.1:38995568-38995587
ATTTGTGTTTTTTTTAAAGTTTGAATGACG38995568ATTGACGCGCTTCTTCAACTTAAACGTACGAACTCCAGAGAGAGGTAAAG
Daucus carota isolate Kuroda chromosome 7.
CP125307.1:39058546-39058565
ATTTGTGTTTTTTTTAAAGTTTGAATGACG39058546ATTGACGCGCTTCTTCAACTTAAACGTACGAACTCCAGAGAGAGGTAAAG
Acinetobacter variabilis RYU24 DNA, complete genome.
AP024524.1:1856434-1856453
CTAATGCATCAACATTAGTATCTGCAACGA1856434ATTGACGCGCTTCTTCAACTGAAGTTAGCAGTTGAGAATGATCTAATACG
Acinetobacter schindleri strain SGAir0122 chromosome, complete genome.
CP025618.2:1794741-1794760
CTAAAGCATCGACGTTAGTATCAGCAACGA1794741ATTGACGCGCTTCTTCAACTGAAGTTAAAAGCTGAGAATGATCGAGTACA
Acinetobacter schindleri strain H3 chromosome, complete genome.
CP030754.1:1659228-1659247
CTAAAGCATCAACGTTAGTATCAGCTACGA1659228ATTGACGCGCTTCTTCAACTGAAGTTAAAAGCTGAGAATGATCGAGTACA
Acinetobacter schindleri strain HZE23-1 chromosome, complete genome.
CP044463.1:1710585-1710604
CTAAAGCATCGACGTTAGTATCAGCAACGA1710585ATTGACGCGCTTCTTCAACTGAAGTTAAAAGCTGAGAATGATCTAGTACA
Acinetobacter schindleri strain HZE33-1 chromosome, complete genome.
CP044474.1:199159-199178
CTAAAGCATCGACGTTAGTATCAGCAACGA199159ATTGACGCGCTTCTTCAACTGAAGTTAAAAGCTGAGAATGATCGAGCACA
Acinetobacter schindleri strain HZE30-1 chromosome, complete genome.
CP044483.1:1678708-1678727
CTAAAGCATCGACGTTAGTATCAGCAACGA1678708ATTGACGCGCTTCTTCAACTGAAGTTAAAAGCTGAGAATGATCTAGTACG
Acinetobacter schindleri strain MCDA01 chromosome, complete genome.
CP076603.1:1802053-1802072
CTAAAGCATCAACGTTAGTATCAGCTACGA1802053ATTGACGCGCTTCTTCAACTGAAGTTAAAAGCTGAGAATGATCGAGTACA
Acinetobacter schindleri strain H4-3-C1 chromosome, complete genome.
CP095872.1:1809249-1809268
CTAAAGCATCAACGTTAGTATCAGCTACGA1809249ATTGACGCGCTTCTTCAACTGAAGTTAAAAGCTGAGAATGATCGAGTACA
Acinetobacter schindleri strain ACE, complete genome.
CP015615.1:1299666-1299685
CGTACTAGATCATTCTCAGCTTTTAACTTC1299666AGTTGAAGAAGCGCGTCAATTCGTTGCTGATACTAACGTCGATGCTTTAG
Acinetobacter schindleri strain BDT2091 chromosome, complete genome.
CP094834.1:1287528-1287547
TGTACTAGATCATTCTCAGCTTTTAACTTC1287528AGTTGAAGAAGCGCGTCAATTCGTTGCTGATACTAACGTCGATGCTTTAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATTGACGCGCTTCTTCAACT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTGACGCGCTTCTTCAACT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.167 | 0.158 | search_plus_done; http://172.18.8.135:50400/match?q=ATTGACGCGCTTCTTCAACT&k=0&no_gap=0&offset=0&limit=50
0.270 | 0.104 | search_minus_done; http://172.18.8.135:50400/match?q=AGTTGAAGAAGCGCGTCAAT&k=0&no_gap=0&offset=0&limit=40
0.272 | 0.002 | cgi_end;

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