GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 17:41:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, clone: LjB12F21, BM1379.
AP008030.2:40158-40177
TTATAAAAAAATGAATATTGTTTGGATGAT40158ATTGATGAAACTCACGTTTGAAACTATAATTAATATATATATATATACAG
Lotus japonicus genomic DNA, chromosome 5, clone: LjT09O10, TM0341.
AP006655.1:12479-12498
TTATAAAAAAATGAATATTGTTTGGATGAT12479ATTGATGAAACTCACGTTTGAAACTATAATTAATTAATATATATATATAT
Eustoma grandiflorum DNA, chromosome 21, draft genome sequence.
AP025060.1:17006462-17006481
AATGATATTCCTTTAGCTTTGCATACTATC17006462ATTGATGAAACTCACGTTTGGGATGTTGGAAACATGTGTGAGTTGATTGG
Yponomeuta cagnagella genome assembly, chromosome: 6.
OX371273.1:4689974-4689993
GTGCTGAGGCGTCAATGGATAAAAACTTAT4689974ATTGATGAAACTCACGTTTGGCACATCAATTCGATTCTACGCGGAACGTG
Lotus japonicus genomic DNA, chromosome 5, clone: LjB26D17, BM1652.
AP008196.2:5407-5426
ATATATATATATATTAATTAATTATAGTTT5407CAAACGTGAGTTTCATCAATATCATCCAAACAATATTCATTTTTTTATAA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:27893380-27893399
ATATATATATATATATATTAATTATAGTTT27893380CAAACGTGAGTTTCATCAATATCATCCAAACAATATTCATTTTTTTATAA
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:47035521-47035540
ATATATATATATATTAATTAATTATAGTTT47035521CAAACGTGAGTTTCATCAATATCATCCAAACAATATTCATTTTTTTATAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATTGATGAAACTCACGTTTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTGATGAAACTCACGTTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.093 | 0.084 | search_plus_done; http://172.18.8.135:50400/match?q=ATTGATGAAACTCACGTTTG&k=0&no_gap=0&offset=0&limit=50
0.112 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=CAAACGTGAGTTTCATCAAT&k=0&no_gap=0&offset=0&limit=46
0.114 | 0.002 | cgi_end;

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