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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:41:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Orcinus orca genome assembly, chromosome: 5.
OW443364.1:138135723-138135742
TCTCACAAAATAAAAATGAATGGATGCTTC138135723ATTGGAAGTTGGGGGAAAAAAAAAAAACTTGATCACCATTGTGTGTGGCC
Balaenoptera acutorostrata genome assembly, chromosome: 9.
OX465359.1:53510622-53510641
AGAAATGGCATCAATGTTCTCAATAATAAC53510622ATTGGAAGTTGGGGGAAAAAACAAAGAAACTTCTAAGTGAAAAGATTTTC
Stenella coeruleoalba genome assembly, chromosome: 5.
OX596389.1:133473565-133473584
TCTCACAAAATAAAAATGAATGGATGCTTC133473565ATTGGAAGTTGGGGGAAAAAAAAAAAACTTGATCACCATTGTGTGTGGCC
Larimichthys crocea genome assembly, chromosome: XX.
LT972187.1:1007754-1007773
AAATTCATCAAAAATATGTAGTGCAGTAAA1007754ATTGGAAGTTGGGGGAAAAAATAATACTCCAAAATTACAGATACTGCATT
Fraxinus pennsylvanica genome assembly, chromosome: 11.
OU503046.1:10882256-10882275
TGGTTCACAGATAACACTTGGCGAAAATTC10882256ATTGGAAGTTGGGGGAAAAAAGTTTCAATCAAGTGCTGCCACAATAACAC
Fraxinus pennsylvanica genome assembly, chromosome: 11.
OU503046.1:10889167-10889186
TAGTTCACAGATAACACTTGGCGAAAATTC10889167ATTGGAAGTTGGGGGAAAAAAGTTTCAATCAAGTGCTGCCACAATAACAC
Hibiscus tridactylites genome assembly, chromosome: 5.
OY288269.1:38054592-38054611
TGAAATTTGCTTGATGATCAAATTGTGAGA38054592ATTGGAAGTTGGGGGAAAAAGGTTTAAGTGATCGAAAGTTGAGAGATTAA
Anisus vortex genome assembly, chromosome: 2.
OX421493.1:36898842-36898861
ACAATGTTTGGCACAATTCCCTATTTTTTT36898842ATTGGAAGTTGGGGGAAAAAAAGGGGGGAGGGGGCGTTACTTGCCTTCGG
Salticus scenicus genome assembly, chromosome: 2.
OZ005649.1:36777707-36777726
CAATGAGCAATGAAATATTGTTTATAAAAA36777707ATTGGAAGTTGGGGGAAAAAAAACTATTTATATATTTAAGCCATTGGCTG
Meles meles genome assembly, chromosome: 2.
OV277442.1:190122529-190122548
TCTCATGTAAAATTAGAGTTTTGTTTTGCT190122529TTTTTCCCCCAACTTCCAATTCATTAACATTCAGCATGACATTTGCCTGA
Delphinus delphis genome assembly, chromosome: 4.
OX465329.1:11105057-11105076
TGGCCACACACAATGGTGATCAAGTTTTTT11105057TTTTTCCCCCAACTTCCAATGAAGCATCCATTCATTTTTATTTTGTGAGA
Erinaceus europaeus genome assembly, chromosome: 1.
OX485810.1:24896537-24896556
AAAATTTCTGTTCTATTAGAACAAAGTCAT24896537TTTTTCCCCCAACTTCCAATGCAACTATTTAGAGAGAGAAAGAGAGAGAG
Globicephala melas genome assembly, chromosome: 4.
OY734042.1:11107617-11107636
CCACACACAATGGTGATCAAGTTTTTTTTT11107617TTTTTCCCCCAACTTCCAATGAAGCATCCATTCATTTTTATTTTGTGAGA
Coregonus sp. 'balchen' genome assembly, chromosome: 9.
LR778261.1:24102808-24102827
CCCGCGGCCGAAAACATTGTTGCTCCTGAC24102808TTTTTCCCCCAACTTCCAATAAACGACGGAGGGGGTTAAACCGTTTTGAA
Clusia tigrina genome assembly, chromosome: X.
OV050032.1:182526161-182526180
GCAAATAAATGCTTTCATTGAGACGGGAAA182526161TTTTTCCCCCAACTTCCAATAGCATTCCAATGGGAATTTTCAAATCCAAT
Clusia tigrina genome assembly, chromosome: X.
OV050032.1:182526278-182526297
GCAAATAAATGCTTTCATTGAGACGGGAAA182526278TTTTTCCCCCAACTTCCAATAGCATTCCAATGGGAATTTTCAAATCCAAT
Clusia tigrina genome assembly, chromosome: X.
OV050032.1:182526395-182526414
GCAAATAAATGCTTTCATTGAGACGGGAAA182526395TTTTTCCCCCAACTTCCAATAACATTCCAGTGGGAATTTTCAAATCCACA
Anomoia purmunda genome assembly, chromosome: 5.
OX639997.1:21381117-21381136
GATATTAGTGATCGTGTTTACCAAATGCTT21381117TTTTTCCCCCAACTTCCAATCATTCCATGGACGATCCGCTGCGATTGGCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATTGGAAGTTGGGGGAAAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTGGAAGTTGGGGGAAAAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.148 | 0.140 | search_plus_done; http://172.18.8.135:50400/match?q=ATTGGAAGTTGGGGGAAAAA&k=0&no_gap=0&offset=0&limit=50
0.286 | 0.138 | search_minus_done; http://172.18.8.135:50400/match?q=TTTTTCCCCCAACTTCCAAT&k=0&no_gap=0&offset=0&limit=41
0.292 | 0.006 | cgi_end;

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