GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-26 08:02:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Vigna angularis mRNA, clone: VEPS09H14.
HX941922.1:341-360
ATACGCCATCACCAAATTCAACTACCCAGG341ACTCTTAACGGCCCTCCAATACCTCACCTCCGCGCTCGGCGTCTACGTCC
Vigna angularis mRNA, clone: VEPS11_B17.
HX942517.1:328-347
ATACGCCATCACCAAATTCAACTACCCAGG328ACTCTTAACGGCCCTCCAATACCTCACCTCCGCGCTCGGCGTCTACGTCC
Vigna angularis mRNA, clone: VES11C18.
HX946299.1:376-395
ATACGCCATCACCAAATTCAACTACCCAGG376ACTCTTAACGGCCCTCCAATACCTCACCTCCGCGCTCGGCGTCTACGTCC
Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
AP015034.1:57328786-57328805
ATACGCCATCACCAAATTCAACTACCCAGG57328786ACTCTTAACGGCCCTCCAATACCTCACCTCCGCGCTCGGCGTCTACGTCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATTGGAGGGCCGTTAAGAGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTGGAGGGCCGTTAAGAGT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.205 | 0.196 | search_plus_done; http://172.18.8.135:50400/match?q=ATTGGAGGGCCGTTAAGAGT&k=0&no_gap=0&offset=0&limit=50
0.489 | 0.284 | search_minus_done; http://172.18.8.135:50400/match?q=ACTCTTAACGGCCCTCCAAT&k=0&no_gap=0&offset=0&limit=50
0.491 | 0.003 | cgi_end;

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