GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:20:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

CGN-654 Pericarp Coffea canephora cDNA clone cccp14h3 5', mRNA sequence.
DV663831.1:397-423
TTAAAATGCACAAGATAATGGAATTTTATA397ATGAACAGCTAAACAGTACCAACCAATAATTGGTTTGTTTGGATAGGAATGAGTCTT
CGN-10294 Pericarp Coffea canephora cDNA clone cccp18n19 5', mRNA sequence.
DV673983.1:397-423
TTAAAATGCACAAGATAATGGAATTTTATA397ATGAACAGCTAAACAGTACCAACCAATAATTGGTTTGTTTGGATAGGAATGAGTCTT
CGN-10573 Pericarp Coffea canephora cDNA clone cccp19o8 5', mRNA sequence.
DV674172.1:397-423
TTAAAATGCACAAGATAATGGAATTTTATA397ATGAACAGCTAAACAGTACCAACCAATAATTGGTTTGTTTGGATAGGAATGAGTCTT
CGN-10598 Pericarp Coffea canephora cDNA clone cccp26f8 5', mRNA sequence.
DV674186.1:397-423
TTAAAATGCACAAGATAATGGAATTTTATA397ATGAACAGCTAAACAGTACCAACCAATAATTGGTTTGTTTGGATAGGAATGAGTCTT
CGN-12682 Pericarp Coffea canephora cDNA clone cccp18o2 5', mRNA sequence.
DV675633.1:397-423
TTAAAATGCACAAGATAATGGAATTTTATA397ATGAACAGCTAAACAGTACCAACCAATAATTGGTTTGTTTGGATAGGAATGAGTCTT
CGN-12956 Pericarp Coffea canephora cDNA clone cccp15a18 5', mRNA sequence.
DV675821.1:397-423
TTAAAATGCACAAGATAATGGAATTTTATA397ATGAACAGCTAAACAGTACCAACCAATAATTGGTTTGTTTGGATAGGAATGAGTCTT
CGN-16128 Pericarp Coffea canephora cDNA clone cccp11h15 5', mRNA sequence.
DV678379.1:397-423
TTAAAATGCACAAGATAATGGAATTTTATA397ATGAACAGCTAAACAGTACCAACCAATAATTGGTTTGTTTGGATAGGAATGAGTCTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATTGGTTGGTACTGTTTAGCTGTTCAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTGGTTGGTACTGTTTAGCTGTTCAT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.109 | 0.101 | search_plus_done; http://172.18.8.135:50400/match?q=ATTGGTTGGTACTGTTTAGCTGTTCAT&k=0&no_gap=0&offset=0&limit=50
0.512 | 0.403 | search_minus_done; http://172.18.8.135:50400/match?q=ATGAACAGCTAAACAGTACCAACCAAT&k=0&no_gap=0&offset=0&limit=50
0.517 | 0.005 | cgi_end;

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