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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:09:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:248894084-248894103
TGTATGAATTTTTACTAGCTTCTAAAAAGA248894084ATTGTGCTTCGCTAGCCATTTCTACAATAACTTTGTTGCTAGTGATCAAT
Cenchrus americanus genome assembly, chromosome: PMC23DB7.
OX387245.1:94201506-94201525
TATAAACCTGGGGTTGCATGAAACCATTCT94201506ATTGTGCTTCGCTAGCCATTCCATCCCTAAGATCACATCTATGCCCGTAG
Cenchrus americanus genome assembly, chromosome: Pg7.
OZ001403.1:100151987-100152006
TATAAACCTGGGGTTGCATGAAACCATTCT100151987ATTGTGCTTCGCTAGCCATTCCATCCCTAAGATCACATCTATGCCCGTAG
Candidatus Methylopumilus universalis strain MMS-RIV-28 chromosome.
CP040949.1:1199910-1199929
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1199910ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis strain MMS-RIV-57 chromosome.
CP040950.1:1200338-1200357
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1200338ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis strain MMS-RVI-9 chromosome.
CP040951.1:1207504-1207523
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1207504ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis strain MMS-RIV-48 chromosome.
CP040952.1:1200461-1200480
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1200461ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis strain MMS-RVI-51 chromosome.
CP040953.1:1207370-1207389
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1207370ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis strain MMS-RVI-37 chromosome.
CP040954.1:1207372-1207391
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1207372ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis strain MMS-RVI-34 chromosome.
CP040955.1:1207371-1207390
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1207371ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis strain MMS-RIV-46 chromosome.
CP040956.1:1200337-1200356
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1200337ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis strain MMS-RIV-25 chromosome.
CP040957.1:1207378-1207397
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1207378ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis strain MMS-RVI-12 chromosome.
CP040958.1:1213004-1213023
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1213004ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis strain MMS-RVI-8 chromosome.
CP040959.1:1207501-1207520
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1207501ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis strain MMS-RIV-50 chromosome.
CP040960.1:1205835-1205854
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1205835ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis strain MMS-RVI-16 chromosome.
CP040961.1:1205839-1205858
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1205839ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis strain MMS-RIV-30 chromosome.
CP040962.1:1205841-1205860
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1205841ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis strain MMS-RIV-70 chromosome.
CP040963.1:1213810-1213829
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1213810ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis strain MMS-RIV-17 chromosome.
CP040964.1:1196399-1196418
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1196399ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis strain MMS-RII-56 chromosome.
CP040965.1:1218456-1218475
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1218456ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis strain MMS-RVI-13 chromosome.
CP040966.1:1215455-1215474
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1215455ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis strain MMS-VB-60 chromosome.
CP040969.1:1222915-1222934
CGGACTCAATTTTAGCTAATGAGGCCTTTA1222915ATTGTGCTTCGCTAGCCATTAAGTCAGGCCTTTGAAGTCTTGCCTGCTCA
Candidatus Methylopumilus universalis strain MMS-VI-25 chromosome.
CP040973.1:1241554-1241573
CAGCCTCAATTTTAGCTAATGATGCTTTTA1241554ATTGTGCTTCGCTAGCCATTAAGTCAGGTCTTTGAAGTCTAGCCTGCTCA
Candidatus Methylopumilus universalis strain MMS-VI-126 chromosome.
CP040974.1:1235171-1235190
CAGCCTCAATTTTAGCTAATGATGCTTTTA1235171ATTGTGCTTCGCTAGCCATTAAGTCAGGTCTTTGAAGTCTAGCCTGCTCA
Candidatus Methylopumilus planktonicus strain MMS-VB-116 chromosome.
CP040978.1:1263712-1263731
CGGACTCAATTTTAGCTAATGAAGCCTTTA1263712ATTGTGCTTCGCTAGCCATTAAGTCAGGCCTTTGAAGTCTTGCCTGCTCA
Candidatus Methylopumilus planktonicus strain MMS-VI-155 chromosome.
CP040979.1:1254688-1254707
CGGACTCAATTTTAGCTAATGAAGCCTTTA1254688ATTGTGCTTCGCTAGCCATTAAGTCAGGCCTTTGAAGTCTTGCCTGCTCA
Candidatus Methylopumilus planktonicus strain MMS-VI-180 chromosome.
CP040980.1:1264902-1264921
CGGACTCAATTTTAGCTAATGAAGCCTTTA1264902ATTGTGCTTCGCTAGCCATTAAGTCAGGCCTTTGAAGTCTTGCCTGCTCA
Candidatus Methylopumilus planktonicus strain MMS-VB-14 chromosome.
CP040981.1:1258123-1258142
CGGACTCAATTTTAGCTAATGAAGCCTTTA1258123ATTGTGCTTCGCTAGCCATTAAGTCAGGCCTTTGAAGTCTTGCCTGCTCA
Candidatus Methylopumilus planktonicus strain MMS-VI-257 chromosome.
CP040982.1:1264823-1264842
CGGACTCAATTTTAGCTAATGAAGCCTTTA1264823ATTGTGCTTCGCTAGCCATTAAGTCAGGCCTTTGAAGTCTTGCCTGCTCA
Candidatus Methylopumilus planktonicus isolate KE-4b genome assembly, chromosome: KE-4b.
OX095755.1:1236397-1236416
CGGACTCAATTTTAGCTAATGAAGCCTTTA1236397ATTGTGCTTCGCTAGCCATTAAGTCAGGCCTTTGAAGTCTTGCCTGCTCA
Candidatus Methylopumilus universalis isolate MMS-RIV-66 genome assembly, chromosome: MMS-RIV-66.
OX095756.1:1200594-1200613
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1200594ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis isolate MMS-RIV-64 genome assembly, chromosome: MMS-RIV-64.
OX095758.1:1207377-1207396
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1207377ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus planktonicus isolate MaE-M16 genome assembly, chromosome: MaE-M16.
OX095760.1:1231775-1231794
CGGACTCAATTTTAGCTAATGAAGCCTTTA1231775ATTGTGCTTCGCTAGCCATTAAGTCAGGCCTTTGAAGTCTTGCCTGCTCA
Candidatus Methylopumilus universalis isolate MH-M5 genome assembly, chromosome: MH-M5.
OX095761.1:1250976-1250995
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1250976ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus planktonicus isolate MMS-IIA-119 genome assembly, chromosome: MMS-IIA-119.
OX095762.1:1232392-1232411
CGGACTCAATTTTAGCTAATGAAGCCTTTA1232392ATTGTGCTTCGCTAGCCATTAAGTCAGGCCTTTGAAGTCTTGCCTGCTCA
Candidatus Methylopumilus universalis isolate MMS-RIV-55 genome assembly, chromosome: MMS-RIV-55.
OX095763.1:1204062-1204081
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1204062ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGAAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis isolate MMS-RIV-45 genome assembly, chromosome: MMS-RIV-45.
OX095764.1:1205835-1205854
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1205835ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis isolate MMS-RIV-65 genome assembly, chromosome: MMS-RIV-65.
OX095765.1:1195326-1195345
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1195326ATTGTGCTTCGCTAGCCATTAAGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus planktonicus isolate MoH-M8 genome assembly, chromosome: MoH-M8.
OX095766.1:1216457-1216476
CGGACTCAATTTTAGCTAATGAAGCTTTTA1216457ATTGTGCTTCGCTAGCCATTAAGTCAGGTCTTTGCAGTCTTGCCTGCTCA
Candidatus Methylopumilus planktonicus isolate MMS-Ma100-9 genome assembly, chromosome: MMS-Ma100-9.
OX095769.1:1264454-1264473
CGGACTCAATTTTAGCTAATGAAGCTTTTA1264454ATTGTGCTTCGCTAGCCATTAAGTCAGGTCTTTGCAGTCTTGCCTGTTCA
Candidatus Methylopumilus universalis isolate ZlE-M21 genome assembly, chromosome: ZlE-M21.
OX095772.1:1214482-1214501
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1214482ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis isolate MH-M4 genome assembly, chromosome: MH-M4.
OX095774.1:1250746-1250765
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1250746ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis isolate MMS-RIV-39 genome assembly, chromosome: MMS-RIV-39.
OX095776.1:1200345-1200364
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1200345ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis isolate MMS-RIV-35 genome assembly, chromosome: MMS-RIV-35.
OX095777.1:1207375-1207394
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1207375ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis isolate MMS-RIV-58 genome assembly, chromosome: MMS-RIV-58.
OX095778.1:1200318-1200337
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1200318ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus planktonicus isolate MMS-Ma350-1 genome assembly, chromosome: MMS-Ma350-1.
OX095779.1:1277273-1277292
CGGACTCAATTTTAGCTAATGAAGCCTTTA1277273ATTGTGCTTCGCTAGCCATTAAGTCAGGCCTTTGAAGTCTTGCCTGCTCA
Candidatus Methylopumilus universalis isolate MMS-RIV-54 genome assembly, chromosome: MMS-RIV-54.
OX095780.1:1224993-1225012
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1224993ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus planktonicus isolate MoH-M36 genome assembly, chromosome: MoH-M36.
OX095781.1:1247153-1247172
CGGACTCAATTTTAGCTAATGAAGCCTTTA1247153ATTGTGCTTCGCTAGCCATTAAGTCAGGCCTTTGAAGTCTTGCCTGCTCA
Candidatus Methylopumilus planktonicus isolate MsH-M18 genome assembly, chromosome: MsH-M18.
OX095782.1:1268514-1268533
CGGACTCAATTTTAGCTAATGAAGCTTTTA1268514ATTGTGCTTCGCTAGCCATTAAGTCAGGCCTTTGCAGTCTTGCCTGCTCA
Candidatus Methylopumilus planktonicus isolate MMS-VB-100 genome assembly, chromosome: MMS-VB-100.
OX095783.1:1265957-1265976
CGGACTCAATTTTAGCTAATGAAGCCTTTA1265957ATTGTGCTTCGCTAGCCATTAAGTCAGGCCTTTGAAGTCTTGCCTGCTCA
Candidatus Methylopumilus planktonicus isolate MsH-M42 genome assembly, chromosome: MsH-M42.
OX095784.1:1258830-1258849
CGGACTCAATTTTAGCTAATGAAGCTTTTA1258830ATTGTGCTTCGCTAGCCATTAAGTCAGGTCTTTGCAGTCTTGCCTGTTCA
Candidatus Methylopumilus planktonicus isolate LE-M7 genome assembly, chromosome: LE-M7.
OX095789.1:1235257-1235276
CGGACTCAATTTTAGCTAATGAAGCCTTTA1235257ATTGTGCTTCGCTAGCCATTAAGTCAGGCCTTTGAAGTCTTGCCTGCTCA
Candidatus Methylopumilus universalis isolate RH-M37 genome assembly, chromosome: RH-M37.
OX095790.1:1259894-1259913
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1259894ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus planktonicus isolate MoH-M17 genome assembly, chromosome: MoH-M17.
OX095792.1:1254827-1254846
CGGACTCAATTTTAGCTAATGAAGCTTTTA1254827ATTGTGCTTCGCTAGCCATTAAGTCAGGCCTTTGCAGTCTTGCCTGCTCA
Candidatus Methylopumilus planktonicus isolate MoH-M15 genome assembly, chromosome: MoH-M15.
OX095793.1:1216149-1216168
CGGACTCAATTTTAGCTAATGAAGCTTTTA1216149ATTGTGCTTCGCTAGCCATTAAGTCAGGCCTTTGCAGTCTTGCCTGCTCA
Candidatus Methylopumilus universalis isolate MMS-RVI-7 genome assembly, chromosome: MMS-RVI-7.
OX095794.1:1207375-1207394
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1207375ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis isolate MMS-RVI-26 genome assembly, chromosome: MMS-RVI-26.
OX095798.1:1207378-1207397
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1207378ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus universalis isolate GH-M24 genome assembly, chromosome: GH-M24.
OX095799.1:1213905-1213924
CGGACTCAATTTTAGCTAAAGAAGCCTTTA1213905ATTGTGCTTCGCTAGCCATTAAGTCAGGTCTTTGAAGTCTTGCTTGCTCA
Candidatus Methylopumilus universalis isolate MMS-RIV-59 genome assembly, chromosome: MMS-RIV-59.
OX095801.1:1205818-1205837
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1205818ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA
Candidatus Methylopumilus planktonicus isolate MMS-VB-26 genome assembly, chromosome: MMS-VB-26.
OX095802.1:1219659-1219678
CGGACTCAATTTTAGCTAATGAAGCCTTTA1219659ATTGTGCTTCGCTAGCCATTAAGTCAGGCCTTTGAAGTCTTGCCTGCTCA
Candidatus Methylopumilus planktonicus isolate MoH-M19 genome assembly, chromosome: MoH-M19.
OX095803.1:1216458-1216477
CGGACTCAATTTTAGCTAATGAAGCTTTTA1216458ATTGTGCTTCGCTAGCCATTAAGTCAGGTCTTTGCAGTCTTGCCTGCTCA
Candidatus Methylopumilus planktonicus isolate MsH-M39 genome assembly, chromosome: MsH-M39.
OX095804.1:1273394-1273413
CGGACTCAATTTTAGCTAATGAAGCTTTTA1273394ATTGTGCTTCGCTAGCCATTAAGTCAGGCCTTTGCAGTCTTGCCTGCTCA
Candidatus Methylopumilus universalis isolate MMS-RIV-33 genome assembly, chromosome: RIV-33.
OX100899.1:1207059-1207078
CAGCTTCAATTTTAGCTAATGAAGCTTTTA1207059ATTGTGCTTCGCTAGCCATTAGGTCTGGTCTTTGGAGTCTCGCTTGCTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATTGTGCTTCGCTAGCCATT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTGTGCTTCGCTAGCCATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.242 | 0.233 | search_plus_done; http://172.18.8.135:50400/match?q=ATTGTGCTTCGCTAGCCATT&k=0&no_gap=0&offset=0&limit=50
0.363 | 0.121 | search_minus_done; http://172.18.8.135:50400/match?q=AATGGCTAGCGAAGCACAAT&k=0&no_gap=0&offset=0&limit=0
0.363 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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