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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-05 21:39:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます(ミスマッチ挿入欠失

Sequence 12951 from Patent WO2003008540.
HA111320.1:182-201
CATCCAGGTTCTTCTCAGACATCTCCTGGA182ATTTCGGAGCCATCACTTTGCAAGGCCCGCACCATTCGGTGTACATGTCG
947063H03.x1 947 - 2 week shoot from Barkan lab Zea mays cDNA, mRNA sequence.
BG517314.1:404-423
CATCCAGGTTCTTCTCAGACATCTCCTGGA404ATTTCGGAGCCATCACTTTGCAAGGCCCGCACCATTCGGTGTACATGTCG
MEST78-H01.T3 ISUM4-TN Zea mays cDNA clone MEST78-H01 3', mRNA sequence.
BM073998.1:456-475
CATCCAGGTTCTTCTCAGACATCTCCTGGA456ATTTCGGAGCCATCACTTTGCAAGGCCCGCACCATTCGGTGTACATGTCG
Rp1D-4_G04 subtracted cDNA library of maize H95-Rp1D inoculated with Puccinia sorghi isolate IN1 Zea mays cDNA clone Zea_mays_Rp1D-4_G04, mRNA sequence.
CA452678.1:298-317
CATCCAGGTTCTTCTCAGACATCTCCTGGA298ATTTCGGAGCCATCACTTTGCAAGGCCCGCACCATTCGGTGT
QAJ2e10.sg QAJ Zea mays cDNA clone QAJ2e10, mRNA sequence.
CD981611.1:314-333
CATCCAGGTTCTTCTCAGACATCTCCTGGA314ATTTCGGAGCCATCACTTTGCAAGGCCCGCACCATTCGGTGT
QAJ5b09.xg QAJ Zea mays cDNA clone QAJ5b09, mRNA sequence.
CD981933.1:298-317
CATCCAGGTTCTTCTCAGACATCTCCTGGA298ATTTCGGAGCCATCACTTTGCAAGGCCCGCACCATTCGGTGT
QAV1h02.yg QAV Zea mays cDNA clone QAV1h02, mRNA sequence.
CD989995.1:298-317
CATCCAGGTTCTTCTCAGACATCTCCTGGA298ATTTCGGAGCCATCACTTTGCAAGGCCCGCACCATTCGGTGT
QCC12h10.yg QCC Zea mays cDNA clone QCC12h10, mRNA sequence.
CF028625.1:447-466
CATCCAGGTTCTTCTCAGACATCTCCTGGA447ATTTCGGAGCCATCACTTTGCAAGGCCCGCACCATTCGGTGTACATGTCG
QCC13g04.yg QCC Zea mays cDNA clone QCC13g04, mRNA sequence.
CF028676.1:447-466
CATCCAGGTTCTTCTCAGACATCTCCTGGA447ATTTCGGAGCCATCACTTTGCAAGGCCCGCACCATTCGGTGTACATGTCG
QCD9e01.yg QCD Zea mays cDNA clone QCD9e01, mRNA sequence.
CF031783.1:298-317
CATCCAGGTTCTTCTCAGACATCTCCTGGA298ATTTCGGAGCCATCACTTTGCAAGGCCCGCACCATTCGGTGT
QCR3d09.yg QCR Zea mays cDNA clone QCR3d09, mRNA sequence.
CF058898.1:298-317
CATCCAGGTTCTTCTCAGACATCTCCTGGA298ATTTCGGAGCCATCACTTTGCAAGGCCCGCACCATTCGGNG
ZM_BFb0130M12.f ZM_BFb Zea mays cDNA 3', mRNA sequence.
DT944209.1:468-487
CATCCAGGTTCTTCTCAGACATCTCCTGGA468ATTTCGGAGCCATCACTTTGCAAGGCCCGCACCATTCGGTGTACATGTCG
ZM_BFb0384N09.f ZM_BFb Zea mays cDNA 3', mRNA sequence.
EB822820.1:342-361
CATCCAGGTTCTTCTCAGACATCTCCTGGA342ATTTCGGAGCCATCACTTTGCCAGGCCC
ZM_BFc0043I16.f ZM_BFc Zea mays cDNA clone ZM_BFc0043I16 3', mRNA sequence.
EC898597.2:447-466
CATCCAGGTTCTTCTCAAACATCTCCTGGA447ATTTCGGAGCCATCACTTTGCAAGGCCCGCACCATTCGGTGTACATGTCG
ZM_BFc0009N03.r ZM_BFc Zea mays cDNA clone ZM_BFc0009N03 5', mRNA sequence.
EE285901.2:436-455
CATCCAGGTTCTTCTCAGACATCTCCTGGA436ATTTCGGAGCCATCACTTTGCAAGGCCCGCACCATTCGGTGTACATGTCG
ie36f05.b1 WGS-ZmaysF (DH5a methyl filtered) Zea mays genomic clone ie36f05 5', genomic survey sequence.
BZ371469.1:232-251
CATCCAGGTTCTTCTCAGACATCTCCTGGA232ATTTCGGAGCCATCACTTTGCAAGGCCCGCACCTGCAAATATTGTTAATG
PUHIU94TB ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa461O19, genomic survey sequence.
CC414309.1:728-747
CATCCAGGTTCTTCTCAGACATCTCCTGGA728ATTTCGGAGCCATCACTTTGCAAGGCCCGCACCTGCAAATATTGTTAATG
Zea mays genome assembly, chromosome: 10.
LR897976.1:94173587-94173606
CATCCAGGTTCTTCTCAGACATCTCCTGGA94173587ATTTCGGAGCCATCACTTTGCAAGGCCCGCACCTGCAAATATTGTTAATG
Acer campestre genome assembly, chromosome: 10.
OX940808.1:21601867-21601886
CGTCAGTGTACTTTTGTGACAATTCTTGAA21601867ATTTCGGAGCCATCACTTTGCATGGACCACACCTACAGAATTCATCATGA
Sequence 18985 from patent US 7560542.
GP610981.1:185-204
ATAGAGGTGCTTGAAATGGTGCGGGCCTTG185CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
Sequence 70340 from patent US 7560542.
GP662336.1:94-113
CGACATGTACACCGAATGGTGCGGGCCTTG94CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
Sequence 59720 from patent US 7569389.
GP693077.1:307-326
CGACATGTACACCGAATGGTGCGGGCCTTG307CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
Sequence 23996 from patent US 7750207.
GX329921.1:462-481
CGACATGTACACCGAATGGTGCGGGCCTTG462CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
Sequence 23997 from patent US 7750207.
GX329922.1:457-476
CGACATGTACACCGAATGGTGCGGGCCTTG457CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
Sequence 24000 from patent US 7750207.
GX329925.1:447-466
CGACATGTACACCGAATGGTGCGGGCCTTG447CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
Sequence 61638 from patent US 8344211.
GZ681639.1:293-312
CGACATGTACACCGAATGGTGCGGGCCTTG293CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
Sequence 175970 from Patent EP2090662.
HB826756.1:354-373
CGACATGTACACCGAATGGTGCGGGCCTTG354CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
Sequence 175978 from Patent EP2090662.
HB826764.1:462-481
CGACATGTACACCGAATGGTGCGGGCCTTG462CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
945003H11.X1 945 - Mixed adult tissues from Walbot lab, same as 707 (SK) Zea mays cDNA, mRNA sequence.
AW787813.1:318-337
CGACATGTACACCGAATGGTGCGGGCCTTG318CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
945003H11.X3 945 - Mixed adult tissues from Walbot lab, same as 707 (SK) Zea mays cDNA, mRNA sequence.
AW927815.1:324-343
CGACATGTACACCGAATGGTGCGGGCCTTG324CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
za71e05.b50 Maize Glume cDNAs Library Zea mays cDNA clone za71e05 5', mRNA sequence.
BE051002.1:341-360
CGACATGTACACCGAATGGTGCGGGCCTTG341CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
za71e05.g51 Maize Glume cDNAs Library Zea mays cDNA clone za71e05 5', mRNA sequence.
BE051003.1:343-362
CGACATGTACACCGAATGGTGCGGGCCTTG343CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
1000069A10.x2 1000 - Unigene I from Maize Genome Project Zea mays cDNA, mRNA sequence.
BF728906.1:160-179
CGACATGTACACCGAATGGTGCGGGCCTTG160CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGAT
947063H03.y1 947 - 2 week shoot from Barkan lab Zea mays cDNA, mRNA sequence.
BG517315.1:123-142
CGACATGTACACCGAATGGTGCGGGCCTTG123CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
949067A10.y1 949 - Juvenile leaf and shoot cDNA from Steve Moose Zea mays cDNA, mRNA sequence.
BI595754.1:341-360
CGACATGTACACCGAATGGTGCGGGCCTTG341CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGAT
949067A10.y2 949 - Juvenile leaf and shoot cDNA from Steve Moose Zea mays cDNA, mRNA sequence.
BI674768.1:268-287
CGACATGTACACCGAATGGTGCGGGCCTTG268CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
QAG4h12.yg QAG Zea mays cDNA clone QAG4h12, mRNA sequence.
CD979604.1:23-42
ACACCGAATGGTGCGGGCCTTG23CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
QAJ2e10.yg QAJ Zea mays cDNA clone QAJ2e10, mRNA sequence.
CD981612.1:23-42
ACACCGAATGGTGCGGGCCTTG23CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
QAJ5b09.yg QAJ Zea mays cDNA clone QAJ5b09, mRNA sequence.
CD981934.1:23-42
ACACCGAATGGTGCGGGCCTTG23CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
QAP1d12.yg QAP Zea mays cDNA clone QAP1d12, mRNA sequence.
CD988225.1:23-42
ACACCGAATGGTGCGGGCCTTG23CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
QAP3c02.yg QAP Zea mays cDNA clone QAP3c02, mRNA sequence.
CD988369.1:82-101
TANTGATTACACCGAATGGTGCGGGCCTTG82CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
QAP3h12.yg QAP Zea mays cDNA clone QAP3h12, mRNA sequence.
CD988420.1:24-43
TACACCGAATGGTGCGGGCCTTG24CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
QCA20c12.yg QCA Zea mays cDNA clone QCA20c12, mRNA sequence.
CF025753.1:24-43
TACACCGAATGGTGCGGGCCTTG24CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
QCA4c09.yg QCA Zea mays cDNA clone QCA4c09, mRNA sequence.
CF026200.1:23-42
ACACCGAATGGTGCGGGCCTTG23CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
QCC4g10.yg QCC Zea mays cDNA clone QCC4g10, mRNA sequence.
CF029132.1:98-117
CGACATGTACACCGAATGGTGCGGGCCTTG98CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
QCC5h11.yg QCC Zea mays cDNA clone QCC5h11, mRNA sequence.
CF029209.1:23-42
ACACCGAATGGTGCGGGCCTTG23CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
QCC7g07.yg QCC Zea mays cDNA clone QCC7g07, mRNA sequence.
CF029330.1:98-117
CGACATGTACACCGAATGGTGCGGGCCTTG98CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
QCC8c06.yg QCC Zea mays cDNA clone QCC8c06, mRNA sequence.
CF029357.1:98-117
CGACATGTACACCGAATGGTGCGGGCCTTG98CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
3530_1_201_1_H02.y_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence.
CO530613.1:309-328
CGACATGTACACCGAATGGTGCGGGCCTTG309CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
ZM_BFb0130M12.r ZM_BFb Zea mays cDNA 5', mRNA sequence.
DT944210.1:326-345
CGACATGTACACCGAATGGTGCGGGCCTTG326CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
ZM_BFb0192N14.r ZM_BFb Zea mays cDNA 5', mRNA sequence.
DV512263.1:260-279
CGACATGTACACCGAATGGTGCGGGCCTTG260CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
1000069-A10.GAD10-F UGI-Reseq Zea mays cDNA, mRNA sequence.
DV550919.1:385-404
CGACATGTACACCGAATGGTGCGGGCCTTG385CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
ZM_BFb0384N09.r ZM_BFb Zea mays cDNA 5', mRNA sequence.
EB822821.1:9-28
GGGCCTTG9CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
ZM_BFc0043I16.r ZM_BFc Zea mays cDNA clone ZM_BFc0043I16 5', mRNA sequence.
EC898598.2:356-375
CGACATGTACACCGAATGGTGCGGGCCTTG356CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
ZM_BFc0115J03.r ZM_BFc Zea mays cDNA clone ZM_BFc0115J03 5', mRNA sequence.
EE045742.2:420-439
CGACATGTACACCGAATGGTGCGGGCCTTG420CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
ZM_BFc0171L11.r ZM_BFc Zea mays cDNA clone ZM_BFc0171L11 5', mRNA sequence.
EE186349.2:319-338
CGACATGTACACCGAATGGTGCGGGCCTTG319CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
ZM_BFc0009N03.f ZM_BFc Zea mays cDNA clone ZM_BFc0009N03 3', mRNA sequence.
EE285900.2:329-348
CGACATGTACACCGAATGGTGCGGGCCTTG329CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
22848825 CERES-505 Zea mays cDNA clone 1610197 5', mRNA sequence.
FK952201.1:342-361
CGACATGTACACCGAATGGTGCGGGCCTTG342CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
15203270 CERES-CN31 Zea mays cDNA clone 1501446 5', mRNA sequence.
FK952202.1:353-372
CGACATGTACACCGAATGGTGCGGGCCTTG353CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
TSA: Zea mays contig58671, mRNA sequence.
EZ057549.1:14-33
GGTGCGGGCCTTG14CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
TSA: Dianthus caryophyllus mRNA, contig: CAK09.763.C1.
FX298108.1:382-401
TGATATGTTCACTCAATGGTGTGGTCCTTG382CAAAGTGATGGCTCCGAAATATGAAAAGTTAGCGCAGGAGAAACTCGATG
TSA: Dianthus caryophyllus mRNA, contig: CAK09.763.C2.
FX298109.1:489-508
TGATATGTTCACTCAATGGTGTGGTCCTTG489CAAAGTGATGGCTCCGAAATATGAAAAGTTAGCGCAGGAGAAACTCGATG
OGBAC02TC ZM_0.7_1.5_KB Zea mays genomic clone ZMMBMa0116B03, genomic survey sequence.
BZ640427.1:79-98
CATTAACAATATTTGCAGGTGCGGGCCTTG79CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
PUHIU94TD ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa461O19, genomic survey sequence.
CC414310.1:549-568
CATTAACAATATTTGCAGGTGCGGGCCTTG549CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGGAACCTGGAT
OGKAZ72TV ZM_0.7_1.5_KB Zea mays genomic clone ZMMBMa0335K24, genomic survey sequence.
CC612312.1:161-180
CATTAACAATATTTGCAGGTGCGGGCCTTG161CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
PUIFZ73TB ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa0574N02, genomic survey sequence.
CG120750.1:576-595
CATTAACAATATTTGCAGGTGCGGGCCTTG576CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
Zea mays cultivar B73 chromosome 10 clone CH201-478O6, *** SEQUENCING IN PROGRESS ***, 10 unordered pieces.
AC199620.6:60693-60712
CATTAACAATATTTGCAGGTGCGGGCCTTG60693CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
Zea mays cultivar LT2357 chromosome 10.
CP116748.1:60793180-60793199
CATTAACAATATTTGCAGGTGCGGGCCTTG60793180CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
Zea mays clone 94236 mRNA sequence.
DQ246005.1:376-395
CGACATGTACACCGAATGGTGCGGGCCTTG376CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
Zea mays clone 1538632 mRNA sequence.
EU955595.1:305-324
CGACATGTACACCGAATGGTGCGGGCCTTG305CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
Zea mays clone 290305 thioredoxin F-type mRNA, complete cds.
EU965957.1:462-481
CGACATGTACACCGAATGGTGCGGGCCTTG462CAAAGTGATGGCTCCGAAATTCCAGGAGATGTCTGAGAAGAACCTGGATG
Daphnia pulex isolate KAP106 chromosome 6.
CP087232.1:2806404-2806423
CGACTTCTACCGACTGTTTACGGCTGGACG2806404CAAAGTGATGGCTCCGAAATGTTTGAAAGTTAATAATATAAAGGCCCAAC
Daphnia pulex isolate KAP4 chromosome 6.
CP087244.1:2838330-2838349
CGACTTCTACCGACTGTTTACGGCTGGACG2838330CAAAGTGATGGCTCCGAAATGTTTGAAAGTTAATAATAAAAAGGCTCAAC
Daphnia pulex isolate STM2 chromosome 6.
CP087256.1:2894589-2894608
CGACTTCTACCGACTGTTTACGGTTGGACG2894589CAAAGTGATGGCTCCGAAATGTTTGAAAGTTAATAATAAAAAGGCTCAAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATTTCGGAGCCATCACTTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTTCGGAGCCATCACTTTG | format : html | download : | debug :

0.009 | 0.009 | search_start;
1.177 | 1.168 | search_plus_done; http://172.18.8.135:50400/match?q=ATTTCGGAGCCATCACTTTG&k=0&no_gap=0&offset=0&limit=50
2.864 | 1.687 | search_minus_done; http://172.18.8.135:50400/match?q=CAAAGTGATGGCTCCGAAAT&k=0&no_gap=0&offset=0&limit=31
2.900 | 0.036 | cgi_end;

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