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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-15 13:47:23, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mesoplodon bidens genome assembly, chromosome: 2.
OZ071499.1:66474560-66474579
CCTCCCAGTATAGAACCAAACCTCTGGGCA66474560ATTTCTTCCCCCACCAAAACTTCCCTGTCCTGTTTCCAAGTCCCCAGTCT
Mesoplodon bidens genome assembly, chromosome: 2.
OZ073213.1:67599219-67599238
CCTCCCAGTATAGAACCAAACCTCTGGGCA67599219ATTTCTTCCCCCACCAAAACTTCCCTGTCCTGTTTCCAAGTCCCCAGTCT
Sequence 1 from patent US 11396665.
OO402379.1:33716916-33716935
CCTCCCTCTTCCCCCTCGACTGGTCAACTT33716916ATTTCTTCCCCCACCAAAACAATTTCTCCTCCAAAGGGCCAAAAAAAAGT
CATY4465.fwd CATY Aspergillus niger fungal filamentous biomass grown under different carbon sources Aspergillus niger cDNA clone CATY4465 5', mRNA sequence.
EY244869.1:285-304
CCTCCCTCTTCCCCCTCGACTGGTCAACTT285ATTTCTTCCCCCACCAAAACAATTTCTCCTCCAAAGGGCCAAAAAAAAGT
Aspergillus niger contig An18c0170, genomic contig.
AM270409.1:146429-146448
CCTCCCTCTTCCCCCTCGACTGGTCAACTT146429ATTTCTTCCCCCACCAAAACAATTTCTCCTCCAAAGGGCCAAAAAAAAGT
Cucumis melo isolate PI 511890 chromosome 1.
CP136102.1:11379341-11379360
CTTCTATTCTATTCACCCATCCTCAAGACA11379341ATTTCTTCCCCCACCAAAACAAGAAAAATCAAAATGAGAACAGACTGAAG
Malus domestica cultivar Red Fuji chromosome 10.
CP147802.1:1616463-1616482
TTCCCTCTCTTCTTCTTCAAAATTTTCACC1616463ATTTCTTCCCCCACCAAAACCACTGCTTTTGCTCATCATACCACTCCAAT
Malus domestica cultivar Red Fuji chromosome 10.
CP147811.1:953603-953622
TTCCCTCTCTTCTTCTTCAAAATTTTCACC953603ATTTCTTCCCCCACCAAAACCACTGCTTTTGCTCATCATACCACTCCAAT
Pyrus communis genome assembly, chromosome: 2.
OY757069.1:1349196-1349215
CCACACATCTTCTTCTTCAAAATCTTCATT1349196ATTTCTTCCCCCACCAAAACCACTGGGTTTGCTCATCATACCACTCCAAT
Monosporozyma unispora genome assembly, chromosome: N.
OZ188222.1:885817-885836
TCAACAACCACATCAACAACCTATTTCAGA885817ATTTCTTCCCCCACCAAAACCATTCAGATCAAGAACTGAAGAACTACCAA
Millepora dichotoma genome assembly, chromosome: 11.
OZ218612.1:132428561-132428580
ACTTTGCTCATTCACCTCGCACCTGGAACA132428561ATTTCTTCCCCCACCAAAACTCAATTCCCTTCCCACTAAATAAAAGTCTT
Echeneis naucrates genome assembly, chromosome: 14.
LR584055.1:8929439-8929458
TTTAGACGAACATAGTGTGAACACTTGTCT8929439ATTTCTTCCCCCACCAAAACACTGACACTATGTGTTTTGCTTAGATGTCT
Sarcophilus harrisii genome assembly, chromosome: 5.
LR735558.1:84691604-84691623
GATCATTCCAGAACTGTTCTAGCTGGGCTT84691604GTTTTGGTGGGGGAAGAAATCCCTCCAGCAGTGGTCTTTAACATGGCAAA
Hyperoodon ampullatus genome assembly, chromosome: 2.
OX457057.1:119844909-119844928
AGACTGGGGACTTGGAAACAGGACAGGGAA119844909GTTTTGGTGGGGGAAGAAATTGCCCAGAGGTTTGGTTCTATACTGGGAGG
Eptesicus nilssonii genome assembly, chromosome: 13.
OX621292.1:53003097-53003116
CGGCACTGCTCTGGCTTTTGATGAGTAATG53003097GTTTTGGTGGGGGAAGAAATGTTATTAAAACCCAGATCTCTTTACTAGGA
010227KADA025124HT (KADA) A. deliciosa ripe fruit inner cortex Actinidia deliciosa cDNA clone KADAA02512, mRNA sequence.
FG446473.1:130-149
TCTCTCTGTTCTGCGAATTCTATGGTTAGG130GTTTTGGTGGGGGAAGAAATGGCTTAACAATCTCTGATCTACAGCTTCGT
030505KAZB001204HT (KAZB) Actinidia chinensis young fruit library Actinidia chinensis cDNA clone KAZBB00120, mRNA sequence.
FG520059.1:132-151
TCTCTCTGTTCTGCGAATTCTAGGGTTAGG132GTTTTGGTGGGGGAAGAAATGGCTCAACAATCTCTGATCTACAGCTTCGT
Aspergillus luchuensis IFO 4308 DNA, chromosome 3, nearly complete sequence.
AP024427.1:3151917-3151936
ACTTTTTTTTGGCCCTTTGGAGGAGAAATT3151917GTTTTGGTGGGGGAAGAAATAAGTTGACCAGTCGAGGGGGAAGAGGGAGG
Aspergillus luchuensis RIB2601 DNA, chromosome 3, nearly complete sequence.
AP024436.1:3130823-3130842
ACTTTTTTTTGGCCCTTTGGAGGAGAAATT3130823GTTTTGGTGGGGGAAGAAATAAGTTGACCAGTCGAGGGGGAAGAGGGAGG
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:41950890-41950909
ATTGGAGTGGTATGATGAGCAAAAGCAGTG41950890GTTTTGGTGGGGGAAGAAATGGTGAAGATTTTGAAGAAGGAGAGGGGGAA
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:42793614-42793633
TGGAGTGTGGTATGATGAGCAAAAGCAGTG42793614GTTTTGGTGGGGGAAGAAATGGTGAAGATTTTGAAGAAGGAGAGGGGGAA
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:40407426-40407445
ATTGGAGTGGTATGATGAGCAAAAGCAGTG40407426GTTTTGGTGGGGGAAGAAATGGTGAAGATTTTGAAGAAGGAGAGGGGGAA
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:40561931-40561950
ATTGGAGTGGTATGATGAGCAAAAGCAGTG40561931GTTTTGGTGGGGGAAGAAATGGTGAAGATTTTGAAGAAGAAGAAGATGTG
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:43428574-43428593
ATTGGAGTGGTATGATGAGCAAAAGCAGTG43428574GTTTTGGTGGGGGAAGAAATGGTGAAAATTTTGAAGAAGAAGAGAGGGAA
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143384.1:38872692-38872711
ATTGGAGTGGTATGATGAGCAAAAGCAGTG38872692GTTTTGGTGGGGGAAGAAATGGTGAAGATTTTGAAGAAGAAGATGTGTGG
Malus coronaria cultivar PI590014 chromosome 10.
CP154767.1:43973837-43973856
ATTGGAGTGGTATGATGAGCAAAAGCAGTG43973837GTTTTGGTGGGGGAAGAAATGGTGAAAATTTTGAAGAAGAAGAGAGGGAA
Chaenomeles sinensis isolate sampleA chromosome 02.
CP162365.1:37244484-37244503
ATTCGAGTGGTATGACGAGCAAACCCAGTG37244484GTTTTGGTGGGGGAAGAAATAATGAAGATTTTGAAGAAGAAGATATGTGG
Malus domestica cultivar WA 38 chromosome 10B.
CP165693.1:43096646-43096665
ATTGGAGTGGTATGATGAGCAAAAGCAGTG43096646GTTTTGGTGGGGGAAGAAATGGTGAAGATTTTGAAGAAGGAGAGGGGGAA
Malus domestica cultivar WA 38 chromosome 10A.
CP165710.1:41165028-41165047
ATTGGAGTGGTATGATGAGCAAAAGCAGTG41165028GTTTTGGTGGGGGAAGAAATGGTGAAAATTTTGAAGAAGAAGAGAGGGAA
Aspergillus tubingensis strain DFA chromosome 3.
CP166484.1:3487989-3488008
GACTTTTTTTGGCCCTTTGGAGGAGAAATT3487989GTTTTGGTGGGGGAAGAAATAAGTTGACCAGTCGAGGGGGAAGAGGGAGG
Malus domestica cultivar Golden Delicious chromosome 10.
CP168774.1:42016485-42016504
ATTGGAGTGGTATGATGAGCAAAAGCAGTG42016485GTTTTGGTGGGGGAAGAAATGGTGAAGATTTTGAAGAAGGAGAGGGGGAA
Malus domestica cultivar Golden Delicious chromosome 10.
CP168791.1:42162930-42162949
ATTGGAGTGGTATGATGAGCAAAAGCAGTG42162930GTTTTGGTGGGGGAAGAAATGGTGAAGATTTTGAAGAAGAAGAGAGGGAA
Cucumis melo genomic scaffold, anchoredscaffold00046.
LN681802.1:2761846-2761865
CTTCAGTCTGTTCTCATTTTGATTTTTCTT2761846GTTTTGGTGGGGGAAGAAATTGTCTTGAGGATGGGTGAATATAATAGAAG
Cucumis melo genomic chromosome, chr_1.
LN713255.1:26568038-26568057
CTTCAGTCTGTTCTCATTTTGATTTTTCTT26568038GTTTTGGTGGGGGAAGAAATTGTCTTGAGGATGGGTGAATATAATAGAAG
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:41900959-41900978
ATTGGAGTGGTATGATGAGCAAAAGCAGTG41900959GTTTTGGTGGGGGAAGAAATGGTGAAAATTTTGAAGAAGAAGAGAGGGAA
Malus domestica genome assembly, chromosome: 10.
OU696686.1:42758179-42758198
ATTGGAGTGGTATGATGAGCAAAAGCAGTG42758179GTTTTGGTGGGGGAAGAAATGGTGAAGATTTTGAAGAAGGAGAGGGGGAA
Malus domestica genome assembly, chromosome: 10.
OU744551.1:42040881-42040900
ATTGGAGTGGTATGATGAGCAAAAGCAGTG42040881GTTTTGGTGGGGGAAGAAATGGTGAAGATTTTGAAGAAGGAGAGGGGGAA
Malus domestica genome assembly, chromosome: 10.
OU744962.1:43292328-43292347
ATTGGAGTGGTATGATGAGCAAAAGCAGTG43292328GTTTTGGTGGGGGAAGAAATGGTGAAGATTTTGAAGAAGGAGAGGGGGAA
Malus domestica genome assembly, chromosome: 10.
OU745000.1:41880455-41880474
ATTGGAGTGGTATGATGAGCAAAAGCAGTG41880455GTTTTGGTGGGGGAAGAAATGGTGAAGATTTTGAAGAAGAAGAGAGGGAA
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:40393110-40393129
ATTGGAGTGGTATGATGAGCAAAAGCAGTG40393110GTTTTGGTGGGGGAAGAAATGGTGAAGATTTTGAAGAAGAAGAGAGGGAA
Crataegus laevigata genome assembly, chromosome: 4.
OY756941.1:40559720-40559739
ATTGGAGTGGTATGATGAGCAAAAGCAGTG40559720GTTTTGGTGGGGGAAGAAATGGTGAAGATTTTGAAGAAGAAGATGTGTGG
Corema album genome assembly, chromosome: 10.
OZ076478.1:30609885-30609904
AGAGGAGGCGGAGAGGGTTATGACTTGTCC30609885GTTTTGGTGGGGGAAGAAATAGTTGCCATGGAAGTGCAGAGAGAAGGGAA
Linnaemya tessellans genome assembly, chromosome: 5.
OX637536.1:24346985-24347004
TTTTTTTGCATGATTTTCCAAATTAAAAAA24346985GTTTTGGTGGGGGAAGAAATAAAAGTGAAGGGAACAACATTAAAAGAAAA
Sepia lycidas genome assembly, chromosome: 7.
OZ010577.1:26352453-26352472
ATCTAAAAGGATTTTGCCCGCGTGGCATTA26352453GTTTTGGTGGGGGAAGAAATAAAGTCTGATAGAATTTGAACGCACCTTGT
Rhimphoctona megacephalus genome assembly, chromosome: 7.
OZ022420.1:9083227-9083246
AATCTCATCCAACGAAAATAATAATTCACG9083227GTTTTGGTGGGGGAAGAAATTTGGCGCCGAGCACTGATCTGAGGAATGGT
Oryzias latipes strain Hd-rR chromosome 15 sequence.
CP020679.1:19778601-19778620
CCACTGCTGAAACTTCAGAATTCTTATTTA19778601GTTTTGGTGGGGGAAGAAATAAGACATAATCAGAAACCTTAAAAAAAAAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATTTCTTCCCCCACCAAAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTTCTTCCCCCACCAAAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.363 | 0.354 | search_plus_done; http://172.18.8.135:50800/match?q=ATTTCTTCCCCCACCAAAAC&k=0&no_gap=0&offset=0&limit=50
0.720 | 0.356 | search_minus_done; http://172.18.8.135:50800/match?q=GTTTTGGTGGGGGAAGAAAT&k=0&no_gap=0&offset=0&limit=38
0.744 | 0.024 | cgi_end;

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