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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-06 09:40:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Oryzias latipes strain HSOK chromosome 4.
CP020624.1:10424498-10424517
GCTGGGTATATCAGGGGGGAAAACGCTGTC10424498ATTTCTTCTGGGCCATTGTGTAGTGCTTTATTGACCTTAAGGGACAGCCC
Oryzias latipes strain Hd-rR chromosome 4 sequence.
CP020668.1:9759288-9759307
GCTGGGTATATCAGGGGGGAAAACGCTGTC9759288ATTTCTTCTGGGCCATTGTGTAGTGCTTTATTGACCTTAAGGGACAGCCC
Oryzias latipes strain HNI chromosome 4.
CP020782.1:9850272-9850291
GCTGGGTATATCAGGGGGGAAAACGCTGTC9850272ATTTCTTCTGGGCCATTGTGTAGTGCTTTATTGACCTTAAGGGACAGCCC
Silurus aristotelis genome assembly, chromosome: 15.
OX327767.1:19656261-19656280
CTCGGGTTAAACAAGTGTCTAGTGGCCATT19656261ATTTCTTCTGGGCCATTGTGGTGCTGAGGTAAGAACAAATGCAAACAGGA
EG-A01_007_E04 Oil palm normal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN599645.1:91-110
GGACTGTTTGGAGGTTAAGCATAATATCAG91ATTTCTTCTGGGCCATTGTGAATTTCATCAGTGTGTTCTTTATGACAATG
MUC4LH1012_G04_.b_024. Musa acuminata leaves HOT stress Musa acuminata subsp. burmannicoides cDNA 5', mRNA sequence.
DN238836.1:124-143
GGACGATATGGCGGTTGAGTATAATATCTG124ATTTCTTCTGGGCCATTGTGAACTCTATAGGATTGTTCTTTATAACAATG
MUC4LH1013_A04_.b_021. Musa acuminata leaves HOT stress Musa acuminata subsp. burmannicoides cDNA 5', mRNA sequence.
DN238859.1:124-143
GGACGATATGGCGGTTGAGTATAATATCTG124ATTTCTTCTGGGCCATTGTGAACTCTATAGGATTGTTCTTTATAACAATG
pOP-EON00478_EST_C_1_pSK_SK EON (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EON00478 similar to glycine-rich protein, mRNA sequence.
DW248194.1:79-98
GGACTGTTTGGAGGTTAAGCATAATATCAG79ATTTCTTCTGGGCCATTGTGAATTTCATCAGTGTGTTCTTTATGACAATG
pOP-EON00936_EST_C_1_pSK_SK EON (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EON00936 similar to glycine-rich protein, mRNA sequence.
DW248603.1:77-96
GGACTGTTTGGAGGTTAAGCATAATATCAG77ATTTCTTCTGGGCCATTGTGAATTTCATCAGTGTGTTCTTTATGACAATG
pOP-EON01003_EST_C_1_pSK_SK EON (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EON01003 similar to glycine-rich protein, mRNA sequence.
DW248665.1:79-98
GGACTGTTTGGAGGTTAAGCATAATATCAG79ATTTCTTCTGGGCCATTGTGAATTTCATCAGTGTGTTCTTTATGACAATG
Embrapa_Musa_ABB_Stressed_Cachaco_DP76TF Embrapa_Musa_Cachaco_ABB_Stressed Musa ABB Group cDNA, mRNA sequence.
FL662009.1:114-133
GGACGATATGGCGGTTGAGTATAATATCTG114ATTTCTTCTGGGCCATTGTGAACTCTATAGGATTGTTCTTTATAACAATG
Embrapa_Musa_ABB_Stressed_Cachaco_DU76TF Embrapa_Musa_Cachaco_ABB_Stressed Musa ABB Group cDNA, mRNA sequence.
FL662448.1:127-146
GGACGATATGGCGGTTGAGTATAATATCTG127ATTTCTTCTGGGCCATTGTGAACTCTATAGGATTGTTCTTTATAACAATG
Embrapa_Musa_ABB_Stressed_Cachaco_E140TF Embrapa_Musa_Cachaco_ABB_Stressed Musa ABB Group cDNA, mRNA sequence.
FL663031.1:127-146
GGACGATATGGCGGTTGAGTATAATATCTG127ATTTCTTCTGGGCCATTGTGAACTCTATAGGATTGTTCTTTATAACAATG
Embrapa_Musa_ABB_Stressed_Cachaco_E296TF Embrapa_Musa_Cachaco_ABB_Stressed Musa ABB Group cDNA, mRNA sequence.
FL663172.1:114-133
GGACGATATGGCGGTTGAGTATAATATCTG114ATTTCTTCTGGGCCATTGTGAACTCTATAGGATTGTTCTTTATAACAATG
Embrapa_Musa_ABB_Stressed_Cachaco_EF06TF Embrapa_Musa_Cachaco_ABB_Stressed Musa ABB Group cDNA, mRNA sequence.
FL664226.1:114-133
GGACGATATGGCGGTTGAGTATAATATCTG114ATTTCTTCTGGGCCATTGTGAACTCTATAGGATTGTTCTTTATAACAATG
Embrapa_Musa_ABB_Stressed_Cachaco_EK47TF Embrapa_Musa_Cachaco_ABB_Stressed Musa ABB Group cDNA, mRNA sequence.
FL664626.1:97-116
GGACGATATGGCGGTTGAGTATAATATCTG97ATTTCTTCTGGGCCATTGTGAACTCTATAGGATTGTTCTTTATAACAATG
Embrapa_Musa_ABB_Stressed_Cachaco_EK63TF Embrapa_Musa_Cachaco_ABB_Stressed Musa ABB Group cDNA, mRNA sequence.
FL664642.1:127-146
GGACGATATGGCGGTTGAGTATAATATCTG127ATTTCTTCTGGGCCATTGTGAACTCTATAGGATTGTTCTTTATAACAATG
Embrapa_Musa_ABB_Stressed_Cachaco_ER44TF Embrapa_Musa_Cachaco_ABB_Stressed Musa ABB Group cDNA, mRNA sequence.
FL665177.1:63-82
GGACGATATGGCGGTTGAGTATAATATCTG63ATTTCTTCTGGGCCATTGTGAACTCTATAGGATTGTTCTTTATAACAATG
MA4LIMFES025D_D12 MA4LIMFES Musa acuminata cDNA clone MA4LIMFES025D_D12 5', mRNA sequence.
JK535767.1:124-143
GGACGATATGGCGGTTGAGTATAATATCTG124ATTTCTTCTGGGCCATTGTGAACTCTATAGGATTGTTCTTTATAACAATG
MAC4-65K03 MA4LIMFES Musa acuminata cDNA clone MAC4-65K03 5', mRNA sequence.
JK538768.1:17-36
TTGAGTATAATATCTG17ATTTCTTCTGGGCCATTGTGAACTCTATAGGATTGTTCTTTATAACAATG
MAC4-62E10 MA4LIMFES Musa acuminata cDNA clone MAC4-62E10 5', mRNA sequence.
JK538769.1:3-22
TG3ATTTCTTCTGGGCCATTGTGAACTCTATAGGATTGTTCTTTATAACAATG
TSA: Musa acuminata AAA Group Unigene84805_B1 mRNA sequence.
JV353255.1:154-173
GGACGATATGGCGGTTGAGTATAATATCTG154ATTTCTTCTGGGCCATTGTGAACTCTATAGGATTGTTCTTTATAACAATG
TSA: Musa acuminata AAA Group Unigene84458_NK1 mRNA sequence.
JV444793.1:63-82
GGACGATATGGCGGTTGAGTATAATATCTG63ATTTCTTCTGGGCCATTGTGAACTCTATAGGATTGTTCTTTATAACAATG
Musa troglodytarum cultivar karat chromosome 9.
CP097511.1:8492295-8492314
GGACGATATGGCGGTTGGGTATAATATCTG8492295ATTTCTTCTGGGCCATTGTGAACTATATAGGATTGTTCTTTATAACAATG
Musa acuminata subsp. burmannicoides var. calcutta 4 mRNA containing microsatellite, clone cl232ct289cn306.
FM878790.1:124-143
GGACGATATGGCGGTTGAGTATAATATCTG124ATTTCTTCTGGGCCATTGTGAACTCTATAGGATTGTTCTTTATAACAATG
Trifolium fragiferum genome assembly, chromosome: 3.
OX940791.1:29411854-29411873
GAACTTTATGGCGTATCAAGACAATCACTG29411854ATTTCTTCTGGGCCATTGTGAACTTCATAGGCGTCTTTTTTGCTACTATG
Tachina lurida genome assembly, chromosome: 2.
OX101753.1:80965087-80965106
TTCTTTTTTGCACTCAGAGACGTTTTCAGA80965087ATTTCTTCTGGGCCATTGTGATTCATCTAGTTTTAGGAATGATGGGCCGT
Elaeis guineensis EST, clone (6lib)_isotig32051.
LM626866.1:812-831
CATTGTCATAAAGAACACACTGATGAAATT812CACAATGGCCCAGAAGAAATCTGATATTATGCTTAACCTCCAAACAGTCC
Elaeis guineensis EST, clone (6lib)_isotig38461.
LM634216.1:522-541
CATTGTTACAAAGAACACCACAATGAAGTT522CACAATGGCCCAGAAGAAATCTGATATTATGCTCAACCTCCAAACAGTCC
TSA: Elaeis guineensis isotig08908.Elguifruit mRNA sequence.
JO096138.1:454-473
CATTGTCATAAAGAACACACTGATGAAATT454CACAATGGCCCAGAAGAAATCTGATATTATGCTTAACCTCCAAACAGTCC
TSA: Elaeis guineensis isotig10321.Elguifruit mRNA sequence.
JO097548.1:375-394
CATTGTTACAAAGAACACCACAATGAAGTT375CACAATGGCCCAGAAGAAATCTGATATTATGCTCAACCTCCAAACAGTCC
TSA: Rhynchophorus ferrugineus contig01680.Rhfeelpa mRNA sequence.
JR469143.1:436-455
CATTGTGATAAAGAACACCCCGATGAAGTT436CACAATGGCCCAGAAGAAATCTGATATTATGCTTAACCTCCAAACAGTCC
Musa acuminata subsp. malaccensis isolate AA chromosome 10.
CP126379.1:34178127-34178146
CATTGTTATAAAGAACAATCCTATAGAGTT34178127CACAATGGCCCAGAAGAAATCAGATATTATACTCAACCGCCATATCGTCC
Musa acuminata subsp. malaccensis isolate AA chromosome 21.
CP126390.1:37899057-37899076
CATTGTTATAAAGAACAATCCTATAGAGTT37899057CACAATGGCCCAGAAGAAATCAGATATTATACTCAACCGCCATATCGTCC
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A10.
HG996476.1:31422358-31422377
CATTGTTATAAAGAACAATCCTATAGAGTT31422358CACAATGGCCCAGAAGAAATCAGATATTATACTCAACCGCCATATCGTCC
Musa schizocarpa genome assembly, chromosome: S10.
LS990924.1:35183290-35183309
CATTGTTATAAAGAACAATCCTATAGAGTT35183290CACAATGGCCCAGAAGAAATCAGATATTATACTCAACCGCCATATCGTCC
Cornus suecica genome assembly, chromosome: 9.
OY998246.1:12730560-12730579
CATTGTCGCGAAAAACACTCCAATGAAGTT12730560CACAATGGCCCAGAAGAAATCAGTGATTGTACTCAATCGCCATATTGATC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATTTCTTCTGGGCCATTGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTTCTTCTGGGCCATTGTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
1.549 | 1.540 | search_plus_done; http://172.18.8.135:50400/match?q=ATTTCTTCTGGGCCATTGTG&k=0&no_gap=0&offset=0&limit=50
1.906 | 0.357 | search_minus_done; http://172.18.8.135:50400/match?q=CACAATGGCCCAGAAGAAAT&k=0&no_gap=0&offset=0&limit=23
1.913 | 0.007 | cgi_end;

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