GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:28:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Brassica oleracea transcription factor-like protein (T2I1_290) gene, partial cds; putative oleosin (GRP1), putative oleosin (GRP2), putative oleosin (GRP3), putative oleosin (GRP4), and putative oleos
AY028608.1:9280-9299
CTGTATTTTAAATTTTTAATCAAGTAATCA9280ATTTGCTCACAGTTCGTGACAAAAAAAAGAAGAAGCAAATATATGAAATG
B.oleracea mRNA for pollen coat oleosin, clone gbopc4.
X96410.1:699-718
CTGTATTTTAAATTTTTAATCAAGTAATCA699ATTTGCTCACAGTTCGTGACAAAAAAAAGAAGAAGCAAATATATGAAATG
Brassica oleracea clone BAC Bo37N21, partial sequence.
AY350710.1:40293-40312
CATTTCATATATTTGCTTCTTCTTTTTTTT40293GTCACGAACTGTGAGCAAATTGATTACTTGATTAAAAATTTAAAATACAG
Abrostola tripartita genome assembly, chromosome: Z.
HG996486.1:11929392-11929411
AAGACTGACAGCGTGGCGTTTCATCGTTAA11929392GTCACGAACTGTGAGCAAATTGACTTCTTGGCCAGCAACGGGGCCTCCAT
Abrostola tripartita genome assembly, chromosome: Z.
HG996486.1:11938535-11938554
AAGACTGACAGCGTGGCGTTTCATCGTTAA11938535GTCACGAACTGTGAGCAAATTGACTTCTTGGCCAGCAACGGGGCCTCCAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATTTGCTCACAGTTCGTGAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTTGCTCACAGTTCGTGAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.216 | 1.207 | search_plus_done; http://172.18.8.135:50400/match?q=ATTTGCTCACAGTTCGTGAC&k=0&no_gap=0&offset=0&limit=50
1.372 | 0.156 | search_minus_done; http://172.18.8.135:50400/match?q=GTCACGAACTGTGAGCAAAT&k=0&no_gap=0&offset=0&limit=48
1.374 | 0.002 | cgi_end;

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