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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 20:39:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KR 1020140062712-A/30: A method for identifying hot pepper varieties using microsatellites markers.
DI378162.1:1-20
1ATTTGTGGCTTTTCGAAACG
KS16023B02 KS16 Capsicum annuum cDNA, mRNA sequence.
GD071559.1:555-574
ACGGAGCAGCTTTTGATGAAGTGTTTGTAT555ATTTGTGGCTTTTCGAAACGGCGGACGGCGGACCAGACGACATGTGGTGG
TSA: Capsicum annuum MGMT_Contig20515, mRNA sequence.
JW070759.1:566-585
ACGGAGCAGCTTTTGATGAAGTGTTTGTAT566ATTTGTGGCTTTTCGAAACGGCGGACGGCGGACCAGACGACATGTGGTGG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:50409936-50409955
ACGGAGCAGCTTTTGATGAAGTGTTTGTAT50409936ATTTGTGGCTTTTCGAAACGGCGGACGGCGGACCAGACGACATGTGGTGG
Vespula germanica genome assembly, chromosome: 2.
HG996529.1:3224854-3224873
TTCATTAATGGCCGATTGTGAAATAGCGAG3224854ATTTGTGGCTTTTCGAAACGGCCCGCAAGTATTACAGGATTTACGAAAGA
KS09056E10 KS09 Capsicum annuum cDNA, mRNA sequence.
CA516334.1:282-301
CCACCACATGTCGTCTGGCTCCGCGTCCGC282CGTTTCGAAAAGCCACAAATATACAAACACTTCATCAAAAGCTGCTC
BJ02012D10 BJ02 Capsicum annuum cDNA 5', mRNA sequence.
CO907079.1:258-277
CCACCACATGTCGTCTGGTCCGCCGTCCGC258CGTTTCGAAAAGCCACAAATATACAAACACTTCATCAAAAGCTGCTCCGT
KS16001H04 KS16 Capsicum annuum cDNA, mRNA sequence.
GD069563.1:242-261
CCACCACATGTCGTCTGGTCCGCCGTCCGC242CGTTTCGAAAAGCCACAAATATACAAACACTTCATCAAAAGCTGCTCCGT
KS16036E04 KS16 Capsicum annuum cDNA, mRNA sequence.
GD072827.1:193-212
CCACCACATGTCGTCTGGTCCGCCGTCCGC193CGTTTCGAAAAGCCACAAATATACAAACACTTCATCAAAAGCTGCTCCGT
KS16051C10 KS16 Capsicum annuum cDNA, mRNA sequence.
GD074226.1:280-299
CCACCACATGTCGTCTGGTCCGCCGTCCGC280CGTTTCGAAAAGCCACAAATATACAAACACTTCATCAAAAGCTGCTCCGT
KS17056G07 KS17 Capsicum annuum cDNA, mRNA sequence.
GD080781.1:266-285
CCACCACATGTCGTCTGGTCCGCCGTCCGC266CGTTTCGAAAAGCCACAAATATACAAACACTTCATCAAAAGCTGCTCCGT
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:203084058-203084077
CCACCACATGTCGTCTGGTCCGCCGTCCGC203084058CGTTTCGAAAAGCCACAAATATACAAACACTTCATCAAAAGCTGCTCCGT
Solanum tuberosum clone AT_113.Z microsatellite sequence.
GQ415751.1:281-300
CCACCACATGTCGTCTGGTCCGCCGTCCGC281CGTTTCGAAAAGCCACAAATATACAAACACTTCATCAAAAGCTGCTCCGT
Vespula vulgaris genome assembly, chromosome: 1.
FR997668.1:16865998-16866017
TCTTTCGTAAATCCTGTAATACTTGCGGGC16865998CGTTTCGAAAAGCCACAAATCTCGCTATTTCACAATCGGCCATTAATGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATTTGTGGCTTTTCGAAACG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTTGTGGCTTTTCGAAACG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.417 | 0.408 | search_plus_done; http://172.18.8.135:50400/match?q=ATTTGTGGCTTTTCGAAACG&k=0&no_gap=0&offset=0&limit=50
1.031 | 0.615 | search_minus_done; http://172.18.8.135:50400/match?q=CGTTTCGAAAAGCCACAAAT&k=0&no_gap=0&offset=0&limit=45
1.037 | 0.006 | cgi_end;

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