GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 00:19:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

JP 1998084965-A/1: Capsicum annuum DNA sequence linked to fertility-restoration gene.
E15675.1:180-199
TCGCTCCTGCCGATTGAATGATCCAGTGAA180ATTTTCAGATTGTGGCGACGTGAGCGGTTCACTGCCCGTTATGTTGTAAG
JP 1998084965-A/2: Capsicum annuum DNA sequence linked to fertility restoration gene.
E15676.1:180-199
TCGCTCCTGCCGATTGAATGATCCAGTGAA180ATTTTCAGATTGTGGCGACGTGAGCGGTTCACTGCCCGTTATGTTGTAAG
JP 1998084965-A/4: PCR primer for Capsicum annuum fertility-restoration gene.
E15678.1:1-20
1ATTTTCAGATTGTGGCGACG
KR 1020160012808-A/12: Nucleic acid molecules and primer sets related to restoration of male sterility in pepper and uses thereof.
LG142599.1:1-20
1ATTTTCAGATTGTGGCGACG
KR 1020160012808-A/9: Nucleic acid molecules and primer sets related to restoration of male sterility in pepper and uses thereof.
LG142596.1:69480-69499
CTTACAACATAACGGGCAGTGAACCGCTCA69480CGTCGCCACAATCTGAAAATTTCACTGGATCATTCAATCGGCAGGAGCGA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:246575356-246575375
CTTACAACATAACGGGCAGTGAACCGCTCA246575356CGTCGCCACAATCTGAAAATTTCACTGGATCATTCAATCGGCAGGAGCGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATTTTCAGATTGTGGCGACG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTTTCAGATTGTGGCGACG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.151 | 0.143 | search_plus_done; http://172.18.8.135:50400/match?q=ATTTTCAGATTGTGGCGACG&k=0&no_gap=0&offset=0&limit=50
0.214 | 0.063 | search_minus_done; http://172.18.8.135:50400/match?q=CGTCGCCACAATCTGAAAAT&k=0&no_gap=0&offset=0&limit=46
0.216 | 0.001 | cgi_end;

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