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Database:

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 09:03:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KS13036H03 KS13 Capsicum annuum cDNA, mRNA sequence.
GD054945.1:103-122
TTTTCATTCTTTCTTTACACCTTGGTTTCT103ATTTTGATGCGTTGCTTTCCTATTAGGACGGTTGAACTTTCTTCTTTATG
KS20005C10 KS20 Capsicum annuum cDNA, mRNA sequence.
GD093760.1:31-50
GCACGAGGCTTTCTTTACACCTTGGTTTCT31ATTTTGATGCGTTGCTTTCCTATTAGGACGGTTGAACTTTCTTCTTTATG
TSA: Capsicum annuum MACs80_10827, mRNA sequence.
JW171918.1:177-196
TTTTCATTCTTTCTTTACACCTTGGTTTCT177ATTTTGATGCGTTGCTTTCCTATTAGGACGGTTGAACTTTCTTCTTTATG
Capsicum annuum Takanotsume DNA, chromosome 4, sequence.
AP026699.1:230978361-230978380
TTTTCATTCTTTCTTTAGAATTTGGTTTCT230978361ATTTTGATGCGTTGCTTTCCTGTTAGTACTGTTGGACTTTCTTTTTAATG
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 10.
CP124710.1:84208286-84208305
CATTGCAGGTATATTTAGATTTTGGTTTCT84208286ATTTTGATGCGTTGCTTTCCTATTAGGACTATTGAACTTTCTTGAGACAT
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 3.
CP124717.1:2154707-2154726
CATTGCAGGTTTCTTTAGACTTTGATTTCT2154707ATTTTGATGCGTTGCTTTCCTATTAAGACGGTTGAACTTTCTTGAGATAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:195723560-195723579
TTTTCATTCTTTCTTTAGAATTTGGTTTCT195723560ATTTTGATGCGTTGCTTTCCTGTTAGGACTGTTGGACTTTCTTCTTAATG
TSA: Capsicum annuum MGMT_Contig40773 mRNA sequence.
JW091017.1:1873-1892
CATAAAGAAGAAAGTTCAACCGTCCTAATA1873GGAAAGCAACGCATCAAAATAGAAACCAAGGTGTAAAGAAAGAATGAAAA
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:59139757-59139776
CATTAAGAAGAAAGTCCAACAGTCCTAACA59139757GGAAAGCAACGCATCAAAATAGAAACCAAATTCTAAAGAAAGAATGAAAA
Capsicum annuum Takanotsume DNA, chromosome 8, sequence.
AP026703.1:157191404-157191423
CATAAAGAAGAAAGTTCAACCGTCCTAATA157191404GGAAAGCAACGCATCAAAATAGAAACCAAGGTGTAAAGAAAGAATGAAAA
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 1.
CP124719.1:137026792-137026811
CATAAAGAAGAAAGTCCAACAGTCCTAATA137026792GGAAAGCAACGCATCAAAATAGAAACCAAAGTCTAAAGAAAGAATGAAAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 8.
CP124724.1:170002171-170002190
CATAAAGAAGAAAGTTCAACCGTCCTAATA170002171GGAAAGCAACGCATCAAAATAGAAACCAAGGTGTAAAGAAAGAATGAAAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 4.
CP124728.1:21908490-21908509
CATTAAAAAGAAAGTCCAACAGTACTAACA21908490GGAAAGCAACGCATCAAAATAGAAACCAAATTCTAAAGAAAGAATGAAAA
Opisthograptis luteolata genome assembly, chromosome: 18.
OV928051.1:280157-280176
GGGCTACACAATGTCTTTCAAGATGGGCGA280157GGAAAGCAACGCATCAAAATATTAAACGTTAATCTATTAATTATTAATGA

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