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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 08:17:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Plectropomus leopardus DNA, chromosome 1, nearly complete sequence.
AP022700.1:22038528-22038547
CGAGACAAGCCATAGCAAAGAAAGTTGCAA22038528AAAACCCCGAAAACACCATTATATGGCATGTCGGAAAAATGATCCGGAAA
Plectropomus leopardus DNA, chromosome 1, nearly complete sequence.
AP022700.1:22039372-22039391
GAAACACACTATAGCATAGAAAGTTGCAAC22039372AAAACCCCGAAAACACCATTATAGGGCATGTTGAAAAAATGATCCAGAAA
nad03-9cs3-g08 Nad03 Nuphar advena cDNA clone nad03-9cs3-g08 5', mRNA sequence.
CK762919.1:334-353
AAACATATCTGCAGGGTCAGATTTGCGAAA334AAAACCCCGAAAACACCATTCTCTCTCGGTAGGCTAGAAAAGTGGTAGCC
Nad03b_118_A04_C005.g1 Nuphar advena flower bud library (Wash U) Nuphar advena cDNA clone 122Jzj_B07 5', mRNA sequence.
FD384709.1:362-381
AAACATATCTGCAGGGTCAGATTTGCGAAA362AAAACCCCGAAAACACCATTCTCTCTCGGTAGGCTAGAAAAGTGGTAGCC
Ananas comosus genome assembly, chromosome: 10.
LR828290.1:11997534-11997553
ATATTTATAAACTCAACTTAAATCATCAAT11997534AAAACCCCGAAAACACCATTAATTTAGAGTAAGTGATTCTTTCAAGTCCT
Oryzias latipes strain Hd-rR chromosome 9 sequence.
CP020673.1:26681331-26681350
CAGACAGCAGTGTATAAGGCTGCTGTGCAA26681331AATGGTGTTTTCGGGGTTTTTTAAGTCTAACATTATCTAACGGGCAGTTG
Rhinatrema bivittatum genome assembly, chromosome: 2.
LR584388.1:85090349-85090368
GAGATAGATTCTAACAGATACAAAAACTGT85090349AATGGTGTTTTCGGGGTTTTTTTGTTTAAATTTTGAACACAGCAGCAGAG
13-L026093.SEQ Pigeonpea genomic pBluescript library Cajanus cajan genomic 3', genomic survey sequence.
CZ445530.1:440-459
TTTTGGGAAATGATGGTCCGATTTGAAGAA440AATGGTGTTTTCGGGGTTTTGGAAAAAATGACGAGAAATGAGGATTTTTG
Sambucus nigra genome assembly, chromosome: 12.
OX422218.1:429608488-429608507
TGTAGAATCCATCATTGAAGTTCACTCTTT429608488AATGGTGTTTTCGGGGTTTTAAGTTTATACATAGCATATACACGTTAACT
Sambucus nigra genome assembly, chromosome: 12.
OX422218.1:429627527-429627546
AGTAGAATCCATCATTGAAGTTCACTCTTT429627527AATGGTGTTTTCGGGGTTTTAAGTTTATACATAGCATATACACGTTAACT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/Aaaaccccgaaaacaccatt
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : Aaaaccccgaaaacaccatt | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.385 | 0.377 | search_plus_done; http://172.18.8.135:50400/match?q=AAAACCCCGAAAACACCATT&k=0&no_gap=0&offset=0&limit=50
0.490 | 0.105 | search_minus_done; http://172.18.8.135:50400/match?q=AATGGTGTTTTCGGGGTTTT&k=0&no_gap=0&offset=0&limit=45
0.493 | 0.003 | cgi_end;

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