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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-12 21:38:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

29-025345-5.SEQ Pigeonpea genomic pBluescript library Cajanus cajan genomic 3', genomic survey sequence.
CZ445553.1:78-97
TAATTTTAATTTTTCTTATCCAATAAATCA78ACCCATTATTGATTTGGGTAAAGTTTGACAAAAACAAAAAAAAATTACAC
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737647.1:16702992-16703011
TATCAACCAAAAAAAAAGGAAAAACGTCTT16702992ACCCATTATTGATTTGGGTATCCATAGCTAGTCTGAACACTTGACAAAAA
Calendula officinalis genome assembly, chromosome: 7.
OY970826.1:53563710-53563729
ATTACATGCTGAAATACTTTGACTCAATTG53563710ACCCATTATTGATTTGGGTATAATCATTGTTAAACCGTTTAACCCGTTCA
Cydia strobilella genome assembly, chromosome: 8.
OX387683.1:4522359-4522378
TCAATCAAATTAAAATTTACACAATTGACT4522359ACCCATTATTGATTTGGGTAGATTCCGTATTTAATTATAGATTTGGAATG
Sisyra terminalis genome assembly, chromosome: 2.
OY292275.1:28882334-28882353
ATTCCACTAACGATTGGTATTACGGTGCGA28882334TACCCAAATCAATAATGGGTCAGTTTAATTCCTCACTACTGATGCTATTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/Acccattattgatttgggta
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : Acccattattgatttgggta | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.390 | 0.381 | search_plus_done; http://172.18.8.135:50400/match?q=ACCCATTATTGATTTGGGTA&k=0&no_gap=0&offset=0&limit=50
0.515 | 0.125 | search_minus_done; http://172.18.8.135:50400/match?q=TACCCAAATCAATAATGGGT&k=0&no_gap=0&offset=0&limit=46
0.516 | 0.001 | cgi_end;

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