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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:33:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Abrostola tripartita genome assembly, chromosome: 22.
HG996508.1:4178710-4178729
GGACAGCATTCTGTTAATTGTAATAAGCTC4178710CAAAAACTTGACGCAAGCAAAATATGAGAATATATTTTGCATACTAAGAT
Catocala sponsa genome assembly, chromosome: 7.
OY751333.1:22284584-22284603
CTTTGCCCGCCCGATAATCAAACCCTATTG22284584CAAAAACTTGACGCAAGCAACTGATAATAGTTTATGCCATGAGGCTAAAA
Gouania willdenowi genome assembly, chromosome: 3.
LR132003.1:17567183-17567202
TTGTCTGGAGGCAGGCGAAGAAGGAGTCTT17567183TTGCTTGCGTCAAGTTTTTGTGAGAAGAATGTTGGCAGCACAGTGGGCAT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:85698494-85698513
TTACCGAGAAGGAATTCTTAACCGACGGTT85698494TTGCTTGCGTCAAGTTTTTGGCGCCATTGCCAGGGAACTAAGTGCAATGA
Panzeria rudis genome assembly, chromosome: 4.
OY101450.1:103434780-103434799
CATCAGTAAGTCAGTAGTGTTTGTATGTAA103434780TTGCTTGCGTCAAGTTTTTGGTTGTCGTTTATTTTTAACCATAATTCATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAAAAACTTGACGCAAGCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAAAAACTTGACGCAAGCAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.160 | 0.152 | search_plus_done; http://172.18.8.135:50400/match?q=CAAAAACTTGACGCAAGCAA&k=0&no_gap=0&offset=0&limit=50
0.246 | 0.086 | search_minus_done; http://172.18.8.135:50400/match?q=TTGCTTGCGTCAAGTTTTTG&k=0&no_gap=0&offset=0&limit=48
0.248 | 0.002 | cgi_end;

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