GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 13:45:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Allium fistulosum mRNA, contig: AFU_05088.
FX558813.1:1300-1326
CAGGCTGGCCTTGCAAACTCCGTTGTTGTT1300CAAAAACTTTGAATTTGTACTTCATCCTTGTTATGTGTGTTGAATTCGAATTTTATT
TSA: Allium cepa CUDHLF2_5455 mRNA sequence.
JR848273.1:798-824
CAGGCTGGCCTTGCAAACTCCGTTGTCATT798CAAAAACTTTGAATTTGTACTTCATCCTTATGTGTGTTGAATTCGAATTTTAATTTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAAAAACTTTGAATTTGTACTTCATCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAAAAACTTTGAATTTGTACTTCATCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.123 | 0.115 | search_plus_done; http://172.18.8.135:50400/match?q=CAAAAACTTTGAATTTGTACTTCATCC&k=0&no_gap=0&offset=0&limit=50
0.149 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=GGATGAAGTACAAATTCAAAGTTTTTG&k=0&no_gap=0&offset=0&limit=48
0.149 | 0.000 | cgi_end;

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