GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-18 18:52:41, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sarcophilus harrisii genome assembly, chromosome: 5.
LR735558.1:240051726-240051746
GGGTCATGGCCAATGTTATCCAGCTAAAGA240051726CAAAAAGCATCAAAATGGTTGCATCCTTAGATCTGGACCAATTAGAAGCAG
KR 1020140035207-A/44: A method for identifying melon varieties using microsatellites markers.
DI376599.1:1-21
1CAAAAAGCATCAAAATGGTTG
KR 1020230019492-A/25: MELON PLANTS RESISTANT TO SCAB DISEASE, APHIDS AND POWDERY MILDEW.
PE323155.1:1-21
1CAAAAAGCATCAAAATGGTTG
JP 2023529630-A/25: Melon plants resistant to Scab disease, aphids and powdery mildew.
PH161828.1:1-21
1CAAAAAGCATCAAAATGGTTG
MAG: Balneola sp. isolate EhC07 chromosome.
CP051255.1:3820052-3820072
TGTTAATCAGATTATAAACGCTGGGTACAA3820052CAAAAAGCATCAAAATGGTTGACATGGTTAAACCACCGATCACTGTTCTGG
Cucumis melo isolate PI 511890 chromosome 2.
CP136103.1:791435-791455
ACCTGCAGATAATTGCTTACTCAGAGATAA791435CAAAAAGCATCAAAATGGTTGATTTTAACTTTTAAGAGAGAGAGAGAGAGA
Cucumis melo genomic scaffold, anchoredscaffold00025.
LN681806.1:787791-787811
ACCTGCAGATAATTGCTTACTCAGAGATAA787791CAAAAAGCATCAAAATGGTTGATTTTAACTTTTAAGAGAGAGAGAGAGAGA
Cucumis melo genomic chromosome, chr_2.
LN713256.1:787791-787811
ACCTGCAGATAATTGCTTACTCAGAGATAA787791CAAAAAGCATCAAAATGGTTGATTTTAACTTTTAAGAGAGAGAGAGAGAGA
Euphrasia confusa genome assembly, chromosome: 1.
OX940949.1:6988566-6988586
GTCTCTCCATAAAGGCTCTATTTTTATTTT6988566CAAAAAGCATCAAAATGGTTGGGAAACACAACCCCAATTCCCAAGTCTATA
Eristalis pertinax genome assembly, chromosome: 2.
OU026146.1:9651260-9651280
GCTGTCAATTCAAGTCTGTCCACTAACTGT9651260CAAAAAGCATCAAAATGGTTGCTTAAGATTCAAAAGAATCCCTTTCCTTTC
Millepora complanata genome assembly, chromosome: 2.
OZ210619.1:28805636-28805656
GTATCAAGATCTTTCTAAAGAAGAGAAGAA28805636CAAAAAGCATCAAAATGGTTGCAAACAATATAAAAATCTCTCAGACTATGA
Millepora alcicornis genome assembly, chromosome: 2.
OZ218835.1:28338215-28338235
GTATCAAGATCTTTCTAAAGAAGAGAAGAA28338215CAAAAAGCATCAAAATGGTTGCAAACAATATAAAAATCTCTCAGACTATGA
Danio aesculapii genome assembly, chromosome: 2.
LR812511.1:41964638-41964658
AAGTGGGTATTTAATCATCCTCTCATTGGT41964638CAAAAAGCATCAAAATGGTTGAACCTCAAACAAGGAGAATGAAGTCCAAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAAAAAGCATCAAAATGGTTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAAAAAGCATCAAAATGGTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.297 | 0.288 | search_plus_done; http://172.18.8.135:50800/match?q=CAAAAAGCATCAAAATGGTTG&k=0&no_gap=0&offset=0&limit=50
0.323 | 0.026 | search_minus_done; http://172.18.8.135:50800/match?q=CAACCATTTTGATGCTTTTTG&k=0&no_gap=0&offset=0&limit=37
0.323 | 0.000 | cgi_end;

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