GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 01:22:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KS19017C07 KS19 Capsicum annuum cDNA, mRNA sequence.
GD088905.1:81-101
TATTGGTGGTATTTTAATTATGTGTGCTTT81CAAAACAATTTGCATGGTGTGTAATTAATACCCATCTACGCACCTTATGGT
KS19022C06 KS19 Capsicum annuum cDNA, mRNA sequence.
GD089351.1:512-532
TATTGGTGGTATTTTAATTATGTGTGCTTT512CAAAACAATTTGCATGGTGTGTAATTAATACCCATCTACGCACCTTATGGT
KS19039G11 KS19 Capsicum annuum cDNA, mRNA sequence.
GD090945.1:243-263
TATTGGTGGTATTTTAATTATGTGTGCTTT243CAAAACAATTTGCATGGTGTGTAATTAATACCCATCTACGCACCTTATGGT
Capsicum annuum Takanotsume DNA, chromosome 8, sequence.
AP026703.1:114049511-114049531
TATTGGTGGTATTTTAATTATGTGTGCTTT114049511CAAAACAATTTGCATGGTGTGTAATTAATACCCATCTACGCACCTTATGGT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 8.
CP124724.1:127357783-127357803
TATTGGTGGTATTTTAATTATGTGTGCTTT127357783CAAAACAATTTGCATGGTGTGTAATTAATACCCATCTACGCACCTTATGGT
Pseudoips prasinana genome assembly, chromosome: 6.
OX621240.1:36888125-36888145
GTATTTTACAACACTTAAATTATGTCTGTT36888125CAAAACAATTTGCATGGTGTGATCTCCTATAATTAAAGATGCATAGGAACT
Oxycera nigricornis genome assembly, chromosome: 5.
OZ012663.1:101330924-101330944
GATTAATTGATACGTTTATTTTTCAATTAA101330924CAAAACAATTTGCATGGTGTGTTATTGATATTCTGATTGGCTACAGTAGAA
TSA: Capsicum annuum CM_MegaContig_33539 mRNA sequence.
JW105763.1:44-64
ACCATAAGGTGCGTAGATGGGTATTAATTA44CACACCATGCAAATTGTTTTGAAAGCACACATAATTAAAATACCACCAATA
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 2.
CP124718.1:7586903-7586923
TATAAGGTACGTAGATGAGTATTAATATTA7586903CACACCATGCAAATTGTTTTGAAAGCACACATAATTAAAATACGAGCAATA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAAAACAATTTGCATGGTGTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAAAACAATTTGCATGGTGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.405 | 0.396 | search_plus_done; http://172.18.8.135:50400/match?q=CAAAACAATTTGCATGGTGTG&k=0&no_gap=0&offset=0&limit=50
0.465 | 0.060 | search_minus_done; http://172.18.8.135:50400/match?q=CACACCATGCAAATTGTTTTG&k=0&no_gap=0&offset=0&limit=43
0.466 | 0.001 | cgi_end;

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