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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:47:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Carassius carassius genome assembly, chromosome: 28.
OY720495.1:9567885-9567904
ATTTAAGGCAACCAATAGAGGTTCGCCCAC9567885CAAAACAGAGGTATTTTGAAAGTGTTTATGTGATTCATATGAACCCAAAT
Chroicocephalus ridibundus genome assembly, chromosome: 5.
OZ001738.1:27127214-27127233
ATGATGATTAGGTAATGCAGTAAATAATTA27127214CAAAACAGAGGTATTTTGAAAACAAAACAAAACACCTTGCATCAAATACA
Larus fuscus genome assembly, chromosome: 5.
OZ010758.1:26501625-26501644
ATGATGATTAGGTAATGCAGTAAATAATTA26501625CAAAACAGAGGTATTTTGAAAACAAAACAAAACACCTTGCATCAAATACA
Synthetic construct bacterial decoy, complete sequence.
MT169739.1:13387931-13387950
AGAGCGAAAATTTTGAGATCAGTGACGAGA13387931CAAAACAGAGGTATTTTGAAATTTTAGAGGAACAAAGAAAGGCGCTTCGT
Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH028_06328m, 5' end sequence.
AB450709.1:9-28
TTTTTTTT9CAAAACAGAGGTATTTTGAAATACCTCATAATGTTGAAACATACATACAT
Ipomoea trifida cultivar NCNSP0306 chromosome 16.
CP025659.1:43105876-43105895
CACCGTTAAAATTTTCGTCAAATAACCGTC43105876CAAAACAGAGGTATTTTGAACTTTTCATACTTTGATCATCTCCTTTACCC
Ipomoea trifida cultivar NCNSP0306 chromosome 16.
CP025659.1:51952352-51952371
CACCGTTAAAATTTTCGTCAAATAACGGTC51952352CAAAACAGAGGTATTTTGAACTTTTCATGCTTTGATCATCTCCTTTACCC
Gossypium bickii isolate GPG1lz chromosome 4.
CP106717.1:29913581-29913600
CTACTCTACAGAGGTGTTTAGGTGATTTTG29913581CAAAACAGAGGTATTTTGAAAATTTTGTAAATCAGGGATGTTTTGGTAAT
Ziziphus jujuba cultivar Dongzao chromosome 2.
CP134452.1:3058860-3058879
ATATTTTTCTTTGATTTTCGGTAATTGAAG3058860CAAAACAGAGGTATTTTGAAATACCTCATAATTTTAAAGGGTTAAATTAA
Campylobacter concisus 13826 chromosome, complete genome.
CP000792.2:1856448-1856467
AGAGCGAAAATTTTGAGATCAGTGACGAGA1856448CAAAACAGAGGTATTTTGAAATTTTAGAGGAACAAAGAAAGGCGCTTCGT
Campylobacter concisus strain P2CDO4 chromosome, complete sequence.
CP021642.1:1778974-1778993
AGAGCGAAAATTTTGAGATCAGTGACGAGA1778974CAAAACAGAGGTATTTTGAAATTTTAGAGGAACAAAGAAAGGCGCTTCGT
Ligdia adustata genome assembly, chromosome: 14.
OX346227.1:6537505-6537524
AGAATAATTTCAAACCAGTGTACTTGAGAG6537505CAAAACAGAGGTATTTTGAAGAGTTGTCTGCAATCAGAAGTGAAGTGGGT
Cerastoderma edule genome assembly, chromosome: 12.
OX401415.1:15561359-15561378
AAGAAATAACCAAGCAAAAAGAAGAAGCAG15561359CAAAACAGAGGTATTTTGAAACTGTTATTACTGCCATATGTTATTTGTTT
Leucophora obtusa genome assembly, chromosome: 3.
OX465297.1:14901208-14901227
CCCAAGTAGGGATAACTGCAAATTGGGTAT14901208CAAAACAGAGGTATTTTGAAGATTATACAGTTGTACAAAAAAATCTTGCA
Catocala sponsa genome assembly, chromosome: 13.
OY751339.1:13482461-13482480
AGAATAATTACAAGCCTTTATATTTGAGAG13482461CAAAACAGAGGTATTTTGAAGAGTTGGCAGCTATTAGAAGTGAAGTAGGA
Azorinus chamasolen genome assembly, chromosome: 2.
OY755236.1:59323141-59323160
ATTCATGAAGAAAAGAAGTTAAAAATTATT59323141CAAAACAGAGGTATTTTGAAGATGCTATAGTACATGAAGCTTTTCTCTTA
Trididemnum clinides genome assembly, chromosome: 4.
OY776287.1:9029325-9029344
TTACTGTAATGGTACCGGAGAGCATTATGA9029325CAAAACAGAGGTATTTTGAAGCGTCCGAGAAAAAAAGCATGCTTGGAGTT
Pleuronectes platessa genome assembly, chromosome: 8.
OX374655.1:22275748-22275767
CAGGTGTGGTTGCGTTAGATTCAATTTCAT22275748TTCAAAATACCTCTGTTTTGGATTTCTACTTTTCTGCAATAAGATGCCAT
Ziziphus jujuba cultivar Dongzao chromosome 2.
CP134452.1:2529342-2529361
ATAGCTCAGGTCTTATCTATGATGAGGTAT2529342TTCAAAATACCTCTGTTTTGGGTAAATTTATAAAATGGGTTGTAGCATGG
Ziziphus jujuba cultivar Dongzao chromosome 2.
CP134452.1:2596764-2596783
ATAGCTCAGGTCTTATCTATCAATGAGGTA2596764TTCAAAATACCTCTGTTTTGGGTAAATTTATAAAATCAGTAATAGCATGT
Potentilla anserina genome assembly, chromosome: 7.
OW176987.1:17851856-17851875
CTGGTACAGGCTAGTCCCTAAATGAGGTAT17851856TTCAAAATACCTCTGTTTTGTTTCTCTTTTATTTATAACCATACTTGCAT
Crataegus laevigata genome assembly, chromosome: 8.
OY756945.1:32735495-32735514
GATGGTTTCTTTCTGCACCAAATGAGGTAT32735495TTCAAAATACCTCTGTTTTGTACAGATTCTCTATCCACCTATTTCTTTTA
Neobacillus sp. PS3-34 chromosome, complete genome.
CP133267.1:4120753-4120772
TACCTTGCATCGACATTATTAAAGTAGATT4120753TTCAAAATACCTCTGTTTTGATGAGGGAGAAAATTGAATCTTTAGCAAAG
Trisateles emortualis genome assembly, chromosome: 14.
OX352743.1:9945072-9945091
TCCCACTTCACTTCTTATAGCTGCTAGTTC9945072TTCAAAATACCTCTGTTTTGCTCGTAAATATATTGGCTTATAATTATTCT
Nymphula nitidulata genome assembly, chromosome: 17.
OX374634.1:320328-320347
TGATTTTATTTTCAAAAGTAAATAGTACCA320328TTCAAAATACCTCTGTTTTGGATTGTTCATTAAATTTTTTAGCGTATCTA
Lycia hirtaria genome assembly, chromosome: 1.
OX387375.1:22788375-22788394
ACCTACTTCACTTCGGATAGCGGCTAGCTC22788375TTCAAAATACCTCTGTTTTGCTCTCAAGTACACAGGTTTGAAATTATTCT
Montipora capitata genome assembly, chromosome: 5.
OX421449.1:6460921-6460940
TTCAAAAGTAATTATTCTTGTTATTATTTA6460921TTCAAAATACCTCTGTTTTGGATTGGCTCAGATACCTCACATGAACAAAT
Leucophora obtusa genome assembly, chromosome: 5.
OX465299.1:191746232-191746251
ATCTCATTTTACTCAAATTATTAATTAAAA191746232TTCAAAATACCTCTGTTTTGTTTAAAAAATATCAAACGCGTATATAATGC
Plusia festucae genome assembly, chromosome: 15.
OX494445.1:7451504-7451523
TCCAACTTCACTTCGCACAGCCGCCAACTC7451504TTCAAAATACCTCTGTTTTGCTCTTAAATATAATGGCTTAAAATTATTCT
Myrrha octodecimguttata genome assembly, chromosome: 2.
OY294057.1:19176583-19176602
TAAAAAATTGGCCAGATTGTTGTGAAAATG19176583TTCAAAATACCTCTGTTTTGAAGGTAAATAATGTTTGCTTGTTCGATATT
Stomoxys calcitrans genome assembly, chromosome: 1.
OY720435.1:89581841-89581860
AATTATGGAATTTTAAAAAATTTAGGAAAT89581841TTCAAAATACCTCTGTTTTGATGTGCATTTTCCACGAAGTGATTTTTGAG
Catocala nupta genome assembly, chromosome: 13.
OY776091.1:15053543-15053562
CCCTACTTCACTTCTAATAGCTGCCAACTC15053543TTCAAAATACCTCTGTTTTGCTCTCAAATATAAAGGCTTGTAATTATTCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAAAACAGAGGTATTTTGAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAAAACAGAGGTATTTTGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.200 | 0.191 | search_plus_done; http://172.18.8.135:50400/match?q=CAAAACAGAGGTATTTTGAA&k=0&no_gap=0&offset=0&limit=50
0.318 | 0.119 | search_minus_done; http://172.18.8.135:50400/match?q=TTCAAAATACCTCTGTTTTG&k=0&no_gap=0&offset=0&limit=33
0.328 | 0.010 | cgi_end;

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