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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-17 00:04:19, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

F-802 Melon phloem library F Cucumis melo cDNA clone PH9C10, mRNA sequence.
EB715125.1:575-593
TTACTCGTCACTGTTGTTGCTGTCACCTTT575CAAAACTCTAAACAACGACTTCTTAAATGATTAAATTCACACTCTATTT
Cucumis melo isolate PI 511890 chromosome 6.
CP136105.1:1806742-1806760
TTACTCGTCACTGTTGTTGCTGTCACCTTT1806742CAAAACTCTAAACAACGACTTCTTAAATGATTAAATTCACACTCTATTT
Cucumis melo genomic scaffold, anchoredscaffold00006.
LN681848.1:1806194-1806212
TTACTCGTCACTGTTGTTGCTGTCACCTTT1806194CAAAACTCTAAACAACGACTTCTTAAATGATTAAATTCACACTCTATTT
Cucumis melo genomic chromosome, chr_6.
LN713260.1:1806194-1806212
TTACTCGTCACTGTTGTTGCTGTCACCTTT1806194CAAAACTCTAAACAACGACTTCTTAAATGATTAAATTCACACTCTATTT
Vicia faba genome assembly, chromosome: 6.
OX451741.1:60002838-60002856
GACAGCGGTGATGGCTAGAGTTTTGAATAT60002838CAAAACTCTAAACAACGACGTGTGAGACGGTGATGATATCGCCCTCTTT
Salix caprea genome assembly, chromosome: 2.
OZ037744.1:2078945-2078963
ATGGTCTAATATTCGAAATTTGGTTGTGGT2078945CAAAACTCTAAACAACGACCTGAAATTTCAACAACAAACAAAAACACAT
Spirometra erinaceieuropaei genome assembly, scaffold: SPER_scaffold0032285.
LN032959.1:4109-4127
CATCCTCGGTTTCCTGCTGCAAAGACTTAC4109CAAAACTCTAAACAACGACAAGGACCGAAAGAATCAGTGTTGTCATCAC
Spirometra erinaceieuropaei genome assembly, scaffold: SPER_scaffold0032285.
LN032959.1:4386-4404
CATCCTCGGTTTCTTGCTGCAAAGAATAAC4386CAAAACTCTAAACAACGACAAGGACCGAAAGAATCAGTATTTTCATCAC
Machimus atricapillus genome assembly, chromosome: 2.
OW121786.1:43086539-43086557
TGAAAATCCAACTCTAACTGCTTCGAATCT43086539CAAAACTCTAAACAACGACATTATTGCTAGCGTGACCAGTAAGCCTACG
Conistra vaccinii genome assembly, chromosome: 2.
OX411317.1:22781090-22781108
CATCGTAGCAACACTCTCACCCACTTCCAC22781090CAAAACTCTAAACAACGACGTCTTAAATAACGTGATATTTTTCTGAACG
Sialis lutaria genome assembly, chromosome: 12.
OX439242.1:11764962-11764980
GTATAGTTATATATCATTTATACATACACT11764962CAAAACTCTAAACAACGACCATCTTATTAACGTACGTTCCGAGAAACGA
Tolmerus cingulatus genome assembly, chromosome: 2.
OY390708.1:12058727-12058745
TGAAAATCCAACACTAACTGCTTCGAATCT12058727CAAAACTCTAAACAACGACATTATTGCTAGCGTGGCCAGTAAGCCTACG
Helleia helle genome assembly, chromosome: 12.
OY971426.1:21445648-21445666
AAAACTATACACAAAAACTACGAAAACAAA21445648CAAAACTCTAAACAACGACAAAAACACTTGTAGCTGACACTCAACCAAA
Euplagia quadripunctaria genome assembly, chromosome: 16.
OY982575.1:2795540-2795558
ATTCAGTATATATTTTGACCTGTCACGGTA2795540CAAAACTCTAAACAACGACAGTCCAAGTTATATTGGTTAATGGAATAAA
Parastichtis suspecta genome assembly, chromosome: 7.
OZ195158.1:18039168-18039186
GTTGACTATACTAATGAAATTCTTGATCAT18039168CAAAACTCTAAACAACGACGTCCTAAAAGTTTTGTGAGTACATACGCAC
Phyllodoce medipapillata genome assembly, chromosome: 3.
OZ210079.1:55086350-55086368
GAAGTTTGCCAAAATATATCATACTGATTG55086350CAAAACTCTAAACAACGACCTAACGCCTTTGAGACTTAACGTCATGTTA
Bitoma crenata genome assembly, chromosome: 5.
OZ210534.1:282352-282370
GTACACGACGCTAAATAGTGTGGAAAAGTC282352CAAAACTCTAAACAACGACACGGCAATTAACGCTATTACAATATGGATC
Gymnoscopelus braueri genome assembly, chromosome: 12.
OY725519.1:49441823-49441841
GGCTTTGAAGGATTCTTCTCTGTGTTCTCG49441823CAAAACTCTAAACAACGACTGGACTACTTGTTTTACAGGTCTGACCCTG
Protomyctophum bolini genome assembly, chromosome: 5.
OZ001270.1:46222546-46222564
GAGTTTGAAGGATTATTCTCCATGTTCTCG46222546CAAAACTCTAAACAACGACTGGACTACTTGTTTTACGAGTCTGTCCCTG
Protomyctophum parallelum genome assembly, chromosome: 7.
OZ077149.1:47661240-47661258
GAGTTTGAAGGATTATTCTCCGTGTTCTCG47661240CAAAACTCTAAACAACGACTGGACTACTTGTTTTACGAGTCTGACCCTG
Protomyctophum parallelum genome assembly, chromosome: 7.
OZ077173.1:40567909-40567927
GAGTTTGAAGGATTATTCTCCGTGTTCTCG40567909CAAAACTCTAAACAACGACTGGACTACTTGTTTTACGAGTCTGACCCTG
Triturus cristatus genome assembly, chromosome: 8.
OZ123749.1:1054288545-1054288563
CACTGCTCCCTTGGAACCTGAGAAGCGCTA1054288545CAAAACTCTAAACAACGACAAAAACAATGACGAAAACTATCCTGAATGA
Lissotriton helveticus genome assembly, chromosome: 12.
OZ180058.1:542198404-542198422
TCTCTGGATTAGGTCTTCACTGGTAGCTCC542198404CAAAACTCTAAACAACGACAGCATCAGGGCTCGAGTCAGGGTACCACGT
BOGMZ32TR BOGM Brassica oleracea genomic clone BOGMZ32, genomic survey sequence.
BH535188.1:2-20
T2GTCGTTGTTTAGAGTTTTGCGCAAGATATGTGTTAAAATGTTCATCATT
Eustoma grandiflorum DNA, chromosome 6, draft genome sequence.
AP025045.1:9592419-9592437
GCCCCAGCGGCTTCGAAACGTTATTACTTC9592419GTCGTTGTTTAGAGTTTTGGGCTTATTACATACCTGTTGGACCGACTTT
Salix babylonica isolate Saba01F chromosome 12Ab.
CP161366.1:12549674-12549692
TATGTTTTTGTATTTTTGTTTAAATTTCAG12549674GTCGTTGTTTAGAGTTTTGAGTCTTTTGACCACAACCGAATTTCGAATA
Salix babylonica isolate Saba01F chromosome 12Bb.
CP161367.1:15686727-15686745
ACGGCGATTTGTTTTTTGTTGAAATTTCAG15686727GTCGTTGTTTAGAGTTTTGACCACAACCAAATTTCGAATATTAGATCAT
Salix babylonica isolate Saba01F chromosome 12Aa.
CP161404.1:12776952-12776970
TATGTTTTTGTATTTTTGTTTAAATTTCAG12776952GTCGTTGTTTAGAGTTTTGAGTCTTTTGACCACAACCGAATTTCGAATA
Salix babylonica isolate Saba01F chromosome 12Ba.
CP161405.1:17444523-17444541
ACGGCGATTTGTTTTTTGTTGAAATTTCAG17444523GTCGTTGTTTAGAGTTTTGACCACAACCAAATTTCGAATATTAGATCAT
Pulicaria dysenterica genome assembly, chromosome: 4.
OX359291.1:43161547-43161565
TTTCCTTCTTTTTATATATTTTGTTTCTTA43161547GTCGTTGTTTAGAGTTTTGCTCCATTTGGTGTGTATTGGTCAGATTTAT
Tamarix gallica genome assembly, chromosome: 9.
OZ123709.1:88625744-88625762
TAGGGTTTGTGTGGACAATTAGGGTTTGTT88625744GTCGTTGTTTAGAGTTTTGTGGTATCATGTGTACTTGGTGATTAAAGTG
Phosphitispora sp. TUW77 chromosome, complete genome.
CP156677.1:410421-410439
TTCTGGACTTATTTTCTTGTACCCAATGCG410421GTCGTTGTTTAGAGTTTTGTCCGGCTTACATCAGCGGCCAACCGCTGGC
Phosphitispora sp. TUW77 chromosome, complete genome.
CP156677.1:425087-425105
TTCTGGACTTATTTTCTTGTACCCAATGCG425087GTCGTTGTTTAGAGTTTTGTCCGGCTTACATCAGCGGCCAACCGCTGGC
Phosphitispora sp. TUW77 chromosome, complete genome.
CP156677.1:923339-923357
TTCTGGACTTATTTTCTTGTACCCAATGCG923339GTCGTTGTTTAGAGTTTTGTCCGGCTTACATCAGCGGCCAACCGCTGGC
Thecophora atra genome assembly, chromosome: 1.
OW569397.1:1636758-1636776
TGCATTTGCATTTACAGTGACTCGTCCCCC1636758GTCGTTGTTTAGAGTTTTGCCCAACACTAAAGTGTTTACACCCCTCTTG
Epinotia ramella genome assembly, chromosome: Z.
OX388200.1:46893392-46893410
AGTGTGAACCATTACTGCAGCGCAAGACCG46893392GTCGTTGTTTAGAGTTTTGAGGCAGTCCTTAGTCTAGCAGTGGATTTCT
Elmis aenea genome assembly, chromosome: 2.
OX393577.1:52500926-52500944
TTTTGATAGCATTCCTTATACCTAAGTGCA52500926GTCGTTGTTTAGAGTTTTGAACTTTATTGAAAATTTTTTGATTTTCATT
Malthinus flaveolus genome assembly, chromosome: 1.
OX467285.1:66201916-66201934
TTTATCAATTTTAGAAAAAGTGAAGTGTCA66201916GTCGTTGTTTAGAGTTTTGCTTGTCCTGAATAGTTCTTTACCGTAATTA
Dasypolia templi genome assembly, chromosome: 10.
OY743146.1:27867638-27867656
AGAATTAGCCACGTGTATGATCGCGAAAGT27867638GTCGTTGTTTAGAGTTTTGTCGTAAATCGAAACAGTGGTAGTGTAATGT
Pollenia griseotomentosa genome assembly, chromosome: 3.
OZ007562.1:147702928-147702946
ACATCTCATTTAGGTCCGAGATTTAACGAT147702928GTCGTTGTTTAGAGTTTTGGTTATGGCTAGACTATCCGTGGAAATACGT
Electrona antarctica genome assembly, chromosome: 2.
OX578247.1:26148101-26148119
CAGGGTCAGACCTGTAAAACAAGTAGTCCA26148101GTCGTTGTTTAGAGTTTTGCGAGAACACGGAGAATAATCCTTCAAACCC
Gymnoscopelus microlampas genome assembly, chromosome: 10.
OY732712.1:8279628-8279646
CAGGGTCAGACCTGTAAAACAAGTAGTCCA8279628GTCGTTGTTTAGAGTTTTGCGAGAACACAGAGAAGAATCCTTCAAAGCC
Nannobrachium achirus genome assembly, chromosome: 9.
OY997646.1:12740200-12740218
CAGGGTCAGACCTGTAAAACAAGTAGTCCA12740200GTCGTTGTTTAGAGTTTTGCGAGAACACAGAGTAGACTCCTTCAAAGCC
Cetorhinus maximus genome assembly, chromosome: 15.
OZ077461.1:104895243-104895261
GAATATAAAAGTGAGGAAAGGACTGATGCT104895243GTCGTTGTTTAGAGTTTTGCTCTGACTCTGGCTGGAAAACTGCATTCAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAAAACTCTAAACAACGAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAAAACTCTAAACAACGAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.397 | 0.388 | search_plus_done; http://172.18.8.135:50800/match?q=CAAAACTCTAAACAACGAC&k=0&no_gap=0&offset=0&limit=50
0.567 | 0.170 | search_minus_done; http://172.18.8.135:50800/match?q=GTCGTTGTTTAGAGTTTTG&k=0&no_gap=0&offset=0&limit=27
0.581 | 0.014 | cgi_end;

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